Detail



ID : Ahg497417

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|497417|fgenesh2_kg.390__1__AT5G43650.1
Sequence
CACAACTCAA AATTGTCAAA CAGACTAAGA GAGAAAAGAT GGATAACTTC TTTCTAGATT TGGTTTGTCA AGAAGACGAC AACTTCTGGG ATCTGATCGG AGACATCTCC GGTAACGATG ACAAAAGCGT CAGTGTGCCA AACAGAAGCG CCTTTAGGTC ATACGTGAAG GGCACAGAAC ATTTGTTGAT GTCGCCGGGG ATAACTTCAT CGAAGGTGAA CGTGAAGAAG AGAATGGTGA ATCTTCTAAG AAAGAATTGG GAGGAGAAGA AAAATGCGGT GGCGCCGGAA AAGGAAAGAT GCCGACGACA TATGTTGAAA GAAAGAACGA GAAGAGAGAA ACAAAAACAG AATTACTTAG CTCTCCACTC TCTACTACCA TTTGCCACTA AGAATGACAA AAATTCGATT GTTGAAAAAG CCGTGGATGA GATTGGGAAA CTACAAAGAT TAAAGAAAGA ACTAGAGAAA AGAATTAAAG TGATTGAGGA AAAATCAGCA AAGGATGATC ATGATAATAT GAGTGAAACA AAAGTTAGGT TTAATCTACA AGAACCTTTG TCTGGACTCG ACTCAATGCT TGAAGTTCTT CATTATCTTA AATCAATGGG AACAAAACTT AAAACAGTCC ACGCCAATTT CTCTCCTCAA GAGTTTTCTG CGACCATGAA CATCGAGACT CAGATTAGAG GAGAAGAGGT TGAAAAGAGA GTGGAGAGAA GACTCCAGGA AAATGAATGG AAACTTCTCT TTCTCCCAGA AGCTTCCTGT TACAAAGACT AATTGTGTTG ACTTTCTGTC ATTAATTTTC TTTTGTTTTT AAATTTGCTT TATTGACACA CATTAAGAAA AA 
Length852
Protein Sequence
Protein Residue
Map Locationscaffold_390: 2782.. 4112
Download Sequence
A.thaliana
AGI-codeAT5G43650.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias[BHLH92]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg932255 phytosulfokine 2 precursor
15.9374 Ahg937315 TRAF-like family protein
26.533 Ahg892017 WRKY DNA-binding protein 62
27.9643 Ahg319217 AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
56.6039 Ahg888852 Powdery mildew resistance protein, RPW8 domain
61.7333 Ahg945916 F-box family protein with a domain of unknown function (DUF295)
72.1665 Ahg951518 mitogen-activated protein kinase kinase kinase 19
72.6223 Ahg492707 NITRATE TRANSPORTER 1.8
73.4302 Ahg918583 Auxin efflux carrier family protein
83.2466 Ahg915669 Glutathione S-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression