Detail



ID : Ahg887559

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887559|Al_scaffold_0398_1
Sequence
ATGTCGCAAT CAACAGTAGA TGTTTCGGCA AAGGGTGGGT TTAGCTTCGA CTTGTGTAAG AGAAATGAGA TGCTTACACA AAAGGGTCTT AAAGCTCCGT CTTTCTTGAA GACTGGAACA ACCATTGTCG GTTTGATTTT CAAGGATGGT GTGATACTAG GGGCAGATAC CCGAGCGACC GAGGGGCCCA TTGTTGCTGA TAAAAACTGT GAAAAGATTC ACTATATGGC ACCAAACATA TATTGTTGTG GTGCAGGAAC CGCGGCTGAC ACTGAAGCAG TTACTGATAT GGTCAGCTCA CAGCTGCGAT TGCATCGTTA CGAGACTGGT CGTGACTCTC GGGTTATTAC TGCTTTAACT CTCCTCAAAA AACATCTTTT CAGCTATCAA GGTCATGTCT CTGCTGCGCT TGTGCTTGGT GGAGTTGATA TCACTGGCCC ACATCTGCAT ACTATTGACC CAAACGGTTT AACTGAAACT CTTCCATTTG CTACAATGGG TTCTGGTTCT CTTGCTGCTA TGTCTGTGTT TGAGGCGAAG TACAAAGAAG GCCTAACTAG GGATGAAGGA ATTAAGTTGG TCGCTGAAGC CATATGCTCT GGTATATTCA ATGACCTGGG TAGTGGTAGC AACGTAGACA TCTGCGTGAT CACAAAGGGG AACAAGGAAT ACCTGAGGAA TTACATGGAA CCAAACCCAA GAACCTATGT CAGCAGCAAA GGCTATTCCT TCACCAAGAA AACCGAGGTT CTTCTTACCA AAATCACCCC ATTGCTGGAG CGAGTCGAAA TTACAGAAGT CGGTGAAGCT ATGGAGGAAT GA 
Length822
Protein Sequence
Protein Residue
Map Locationscaffold_398: 988.. 2663
Download Sequence
A.thaliana
AGI-codeAT3G27430.2
DescriptionN-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
TAIR curator summaryEncodes 20S proteasome beta subunit PBB1 (PBB1).
Alias[PBB1]
Gene coexpression
MR
MR Locus Description
1 Ahg908190 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
5.2915 Ahg908193 lupeol synthase 2
12.9615 Ahg949097 Major facilitator superfamily protein
16 Ahg952134
17.4069 Ahg477299 AGAMOUS-like 67
17.4642 Ahg893406 P-loop containing nucleoside triphosphate hydrolases superfamily protein
20.7846 Ahg950614 AGAMOUS-like 82
65.9545 Ahg908179
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression