Detail



ID : Ahg908190

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|908190|Al_scaffold_0002_1271
Sequence
ATGTCGCAAT CAACAGTAGA TGTTTCGGCA AAGGGTGGGT TTAGCTTCGA CTTGTGTAAG AGAAATGAGA TGCTTACACA AGAGGGTCTT AAAGCTCCGT CTTTCTTGAA GACCGGAACA ACCATTGTCG GTTTGATTTT CAAGGATGGT GTGATACTAG GGGCAGATAC CCGAGCGACC GAGGGGCCCA TTGTTGCTGA TAAAAACTGT GAAAAGATTC ACTATATGGC ACCAAACATA TATTGTTGTG GTGCAGGAAC CGCGGCTGAC ACTGAAGCAG TTACTGATAT GGTCAGCTCA CAGCTGCGAT TGCATCGTTA CGAGACTGGT CGTGACTCTC GGGTTATTAC TGCTTTAACT CTCCTCAAAA AACATCTTTT CAGCTATCAA GGTCATGTCT CTGCTGCGCT TGTGCTTGGT GGAGTTGATA TCACTGGCCC ACATCTGCAT ACTATTGACC CAAACGGTTT AACTGAAACT CTTCCATTTG CTACAATGGG TTCTGGTTCT CTTGCTGCTA TGTCTGTGTT TGAGGCGAAG TACAAAGAAG GCCTAACTAG GGATGAAGGA ATTAAGTTGG TCGCTGAAGC CATATGCTCT GGTATATTCA ATGACCTGGG TAGTGGTAGC AACGTAGACA TCTGCGTGAT CACAAAGGGG AACAAGGAAT ACCTGAGGAA TTACATGGAA CCAAACCCAA GAACCTATGT CAGCAGCAAA GGCTATTCCT TCACCAAGAA AACCGAGGTT CTTCTTACCA AAATCACCCC ATTGCTGGAG CGAGTCGAAA TTACAGAAGT CGGTGAAGCT ATGGAGGAAT GA 
Length822
Protein Sequence
Protein Residue
Map Locationscaffold_2: 10970467.. 10972140
Download Sequence
A.thaliana
AGI-codeAT3G27430.2
DescriptionN-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
TAIR curator summaryEncodes 20S proteasome beta subunit PBB1 (PBB1).
Alias[PBB1]
Gene coexpression
MR
MR Locus Description
1 Ahg887559 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
26.7208 Virus2010
31.273 Ahg950614 AGAMOUS-like 82
38.0526 Ahg901551 arogenate dehydratase 5
42.7083 Ahg922225
44.1928 Ahg931523
46.2817 Ahg479186 Plant invertase/pectin methylesterase inhibitor superfamily protein
53.0471 Ahg924361
55.7494 Ahg496920
58.1464 Ahg332331 Putative membrane lipoprotein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression