Detail



ID : Ahg887721

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887721|Al_scaffold_0372_2
Sequence
ATGATAGTTG CGAGAACAAC TTTACGAGCT CTGCTTGTCT GCGGCGGAGG AAACTGTAAC ATGTTCGTGA GTTCTGTTTC CGCCGCCTCC GTTATGAAAA GTCCGTATGA GAGAACGAAA CCGATGCGAA TTCATGATTG GTGCGGCCGT TTTGGTGATT TTAAGATTGG TTCTAAGCAT GTGCAAGGAG ATTTCAAATT GAGGTGGAGG AGGATGAGTT CTGCATCAGC GACGGAGAAT AAAGATGAAA ATTCGACGGT GAAGAAGGAT CAAAATGGCG GTGGATCGGT GGCGGTTCCA AGTTATTGGG GAATAGAGAC AGCAAAGATG AAAATTACTC GGAAAGATGG ATCGGATTGG CCTTGGAACT GTTTTATGCC ATGGGAGACT TATCAAGCAA ATTTGTCGAT AGATTTGAAG AAGCACCACG TTCCGAACCG ACAAAATCGC TTACCGGATA GTCAAGCTCC TCCGTATTCC CACAGATATA TTTTTCCAGG CATGACCCTC ACGATATGGA TGCAGAGCAA TGATATGCTA GAGACAGTAG CCGCAGTACC AGGAATGGTC GGAGGAATGC TTCTCCACCT AAAATCAATC CGGAAATTCG AACATAGTGG CGGTTGGATC AAAGCATTAC TAGAAGAAGC AGAGAACGAG AGGATGCATC TAATGACGAT GATGGAGTTA GTCAAACCCA AATGGTACGA GCGTCTTCTA GTGATGCTTG TTCAAGGAAT ATTCTTCAAC TCTTTTCTCG TTTGTTACGT GATGTCGCCG CGGTTAGCTC ATCGGATATC GACGATGGGA AGATCGAGAA TGTTGCCGCG CCCGCGATTG CTATTGATTA TTGGAGATTG CCTAAAGATG CTACGTTGGA AAGATGTCGT CACAGTGATT CGTGCTGATG AAGCTCATCA TCGAGATGTC AACCATTTTG CTTCTGACAT TCGCAATCAA GGAAAAGAGT TGCGAGAAGC AGGAGCTCCG ATTGGTTATC ACTAA 
Length1005
Protein Sequence
Protein Residue
Map Locationscaffold_372: 1215.. 2950
Download Sequence
A.thaliana
AGI-codeAT5G64210.1
Descriptionalternative oxidase 2
TAIR curator summaryencodes an isoform of alternative oxidase, which is expressed in rosettes, stems, and roots. Transcript accumulates in dry seeds and decreased upon germination and is not affected by actinomycin A. Protein is localized to mitochondria.
Alias[AOX2][alternative oxidase 2]
Gene coexpression
MR
MR Locus Description
9.74679 Ahg908159
11.3137 Ahg492702 PAK-box/P21-Rho-binding family protein
27.2029 Ahg944810
30.3974 Ahg887750 F-box/RNI-like superfamily protein
36.3318 Ahg923793
37.6962 Ahg924701
38.4187 Ahg906466
38.8844 Ahg921792
42.6615 Ahg901208
49.0204 Ahg487619 synaptosomal-associated protein SNAP25-like 29
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression