Detail



ID : Ahg887791

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887791|Al_scaffold_0658_1
Sequence
ATGGCTGAGT TGATGGAATA CTCGCATCTG GTGGACATGG CTGACAAAAA TGAAGATCCT TACATGAGTA TGGTATATGC ATCATCATGG GCTATCTCTG TGTATTATGC TTACCAGCGT ACCTGGAAGC CGTTCAATCC AATTCTCGGT GAGACTTACG AGATGACTAA TCATAATGGG ATCAATTTTA TAGCTGATCT GCAGGTGAGT CATTTCTTTA GAACTCATAT TCCAATGACC CGAGTGACAC TTAAAAGAGA TGGTGTGGTT CTTGATCTTA TACCTCCCCT GACAAAGGTT CATAACCTTA TCTTCGGTCG AACATGGGTC GATTCGCCAG GAGAGATGGT CATGACGAAC CTGACCACTG ATCAGAGCCG TGGTGGTTTT GCTCGCCATA TTCTCCAACA GAGAGACAAA GAGCTGAGAA GAGAAGCCGA TCGAGAAGAG AAACGGCAAA GATTTGCTCC AAAATGGTTT GATGAAACAG AGGAAGTCAC TCCTACACCA TGGGGTGATC TCCAAGTGTA CCAATTCAAT GGAAAGTACT CGGTGCACCG CGCCACAGCG GATAACTCTG AGGATACAAC GAATGTGAAG TTGAACCAAT TCAACCCTTG GCAATTCCAA GATCTCTCTG CTTAA 
Length645
Protein Sequence
Protein Residue
Map Locationscaffold_6: 482613.. 484327
Download Sequence
A.thaliana
AGI-codeAT5G02100.1
DescriptionOxysterol-binding family protein
TAIR curator summaryEncodes a protein that binds to beta-sitosterol and localizes to the ER. The WFDE motif in ORP3a appears to be important for a direct interaction with PVA12 [Plant VAMP-Associated protein 12]. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.
Alias[ORP3A][UNE18][OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3A][UNFERTILIZED EMBRYO SAC 18]
Gene coexpression
MR
MR Locus Description
11.4891 Ahg949588
17.3781 Ahg902574
19.1311 Ahg929976
19.3391 Ahg912127
21.0238 Ahg937563
27.8388 Virus1570
28.4605 Ahg325730 Plant self-incompatibility protein S1 family
31.241 Ahg917075
37.7492 Ahg489725 Major facilitator superfamily protein
38.1576 Ahg943653 cysteine-rich RLK (RECEPTOR-like protein kinase) 41
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression