Detail



ID : Ahg887940

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|887940|Al_scaffold_0265_1
Sequence
AAAGGGTTTT ACTCTCGAGA TCCAGCTAGT AAGGTGGTAT ATAGCAGTAA CTTCGATCTG TTTAGCTCAC CGGCGGCGAA TTGGAGAGAT ACACTCGGTT GTTATACGGC ACCAGATCCT CCCAGACCGG AGGACTTACC CGCCGCTTGT GAGATGATGA TTGAGTACTC AAAGGAAGTG ATGAAATTAG GTAAATTGCT CTTTGAGCTT CTGTCAGAAG CTCTAGGGTT AAACACTCCT CACAAATGCT CGGACCGGCA CTGCATGGAT TGCACCAACT CCTTGCTGTT GCTCGGCCAT TATTACCCGC CATGTCCCCA ACCCGACCTT ACTTTAGGTT TGACCAAACA CTTCGACAAC TCTTTTCTCA CTATTCTTCT TCAAGACCAT ATCGGAGGGC TTCAAGTTCT CCATGACCAA TATTGGGTTG ATGTTCCTCC TGTTCCCGGA GCTCTTGTTG TTAACGTTGG AGATCTTCTT CAGTTCAAAA GTGTGGAGCA TAGGGTTTTG GCGAATGTAG CTGGACCAAG AATTTCAGTG GCTTGTTTCT TCAGTTCGTA TTTGATGGCG AATCCTCGAG TTTATGGACC CATCAAAGAT ATTGACACCA CCATTACGGA GTATGCAAAG TTCTACAGAT CCAAAGGATT CGATGGTACC TCTGGATTAC TCTATCTCAA GATCTGA 
Length687
Protein Sequence
Protein Residue
Map Locationscaffold_1: 2252810.. 2254514
Download Sequence
A.thaliana
AGI-codeAT1G06620.1
Description2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
TAIR curator summaryencodes a protein whose sequence is similar to a 2-oxoglutarate-dependent dioxygenase
Alias
Gene coexpression
MR
MR Locus Description
10 Ahg948918 Protein of unknown function (DUF784)
29.5635 Ahg926734 gamma carbonic anhydrase 3
29.5635 Ahg947302 gamma carbonic anhydrase 3
30.2985 Ahg948917 Protein of unknown function (DUF784)
44.4747 Ahg355987
48.6415 Ahg497374 cytochrome P450, family 86, subfamily A, polypeptide 1
55.7494 Ahg916106 xyloglucan endotransglucosylase/hydrolase 3
78.1473 Ahg482622
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression