Detail



ID : Ahg889834

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|889834|Al_scaffold_0007_1820
Sequence
AGCCGTAGCT GGATAGAAGC AAGAGAAGCG GGAGCTGCGG CCCTCCGAGA AAGGCCACTC GACAGTGGGT CATTGAGGTT GGGTGTTGGC AAGCTGCCTC TGTTGGATAG AATTTCCAAA ATCGGTGGTA AGCTGTCTTC AGCTCCTTCT TTACCAGAAA TTGCTACCCT GAAGTTGCTT CAATAGGTTA GTGCACTCAT GTTTCTGACC TCAGTTGTTC CTTTCTTCGA CTTCTCAGCG GTTGAGACGA TATCAGCTGA TGCTGTAAGA AACAATTTCG TTGACATGAA AGTTGATCAC ATAAAGGGTG TTGTAATTTT TGGAAATCTG AGTAATGAGT CTGATGGGCT GAAAGAACCT CTAGCTATTT TTGCTGAGAC TATGGACAAA TCAAGAGCGA TGTTATTTCC TGCCCCAAGT AAAGCATCAA AGGTTGGTGA CGTAGTACCA AATCTAGAGG AGACTGTAGA AAAGGAGCAC AAAAGACTGC TTTCTCGGAA ATCAATCATT GAAAAGAGGA AGGAGGAACA AGAGCGTCAG CAACTAGAGA TGGAACTTGA AGAGGAGCAG AGAAAGCTTA AGCTTCTGAA GCTAACCAAT GAGGCAGAAC AGAAGAGACT TGCGACAGAG CTTAAGGAGA GGAGAAGACA CAGAATTCAT AGGGGGATAG AGGAGAAGGT AACAAAGCAA ACCGTGATGG AGAAGGCCAT GAGTGAGAAG CGCAAGGAAG ATCAAGAAAT GGAGAAGAAG CTCCAAAAAC TTGCCAAAAC TATGGATTAT CTGGAACGGG CAAAGAGAGA AGAAGCTTCC CCTATGACCG AGCTGCATAT CAGCAACGAC AAGGAACGTC TTAAGAGTGA CCTGAAGGAG AAAAAAGGTT GGCCAGAATG TTGCATAATA GTGACAAGTC TTCGACAAAC TGAGTTTGAG AGGATAAGAA AAGAGAAAGA GTAGCATATT GGCCAAATAA TTCAAGCCAG GAAACAAGAA AGCGATATTA AGAGGAAACG GATATATCAT TTGAAATCTG AAGAGAAAAA AGCTTCAGGA AGAAGAGGAA GCTCATAG 
Length1068
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7572059.. 7586143
Download Sequence
A.thaliana
AGI-codeAT4G11420.1
Descriptioneukaryotic translation initiation factor 3A
TAIR curator summaryEncodes a subunit of eukaryotic initiation factor 3 (eIF3), a multisubunit complex that is required for binding of mRNA to 40 S ribosomal subunits, stabilization of ternary complex binding to 40 S subunits, and dissociation of 40 and 60 S subunits.
Alias[ATEIF3A-1][ATTIF3A1][EIF3A][EIF3A-1][TIF3A1][eukaryotic translation initiation factor 3A]
Gene coexpression
MR
MR Locus Description
6.48074 Ahg359035 RING/U-box superfamily protein
38.5227 Ahg943888 Sec14p-like phosphatidylinositol transfer family protein
43.9318 Ahg487156 TRF-like 10
46.0977 Ahg475808 cytochrome P450, family 735, subfamily A, polypeptide 2
57.7581 Ahg471504 Protein phosphatase 2A regulatory B subunit family protein
72.6636 Ahg933732 Thioredoxin superfamily protein
84.7113 Ahg320539 Calcium-binding EF-hand family protein
85.7904 Ahg921700 ENTH/VHS/GAT family protein
87.7724 Ahg927869 non-specific phospholipase C3
90.2663 Ahg470378 phospholipid sterol acyl transferase 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression