Detail



ID : Ahg890208

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890208|Al_scaffold_0007_2194
Sequence
ATGGCTGCAA CTGCAATGGA GCCATCTTCA TCTATAAGTT TCACATCTTC TCACTTATCA AATCCTTCTC CTGTTGTTAC TACTTATCAG TCAGCTGCTT ATCTGGAAGA GCTCAGCTCT AACTTGGAGC AGCTTCTCAC TAACCCAGAT TGCGATTATA CCGACGCAGA GATCATTATT GAAGAAGAGG CTAACCCTGT GAGTGTTCAT AGATGTGTTT TAGCTGCAAG GAGCAAGTTT TTTCTTGATC TGTTCAAGAA AGATAAAGAT AGTAGTGCAA AGAGTGAGAA GAAACCAAAG TATCAAATGA AAGAGTTGTT ACCTTATGGA AATGTGGGAC GCGAGGCCTT CCTGCATTTC TTGAACTATA TCTACACTGG GAGGTTAAAG CCTTTTCCTA TCGAGGTTTC GACTTGTGTT GATTCAGTTT GTGCTCATGA TTCTTGTAAA CCGGCCATTG ATTTTGCTGT TGAGTTGATG TATGCTTCAT TTGTGTTCCA AATCCCGGAC CTGGTTTCAT CATTTCAGCG GAAGCTTTGT AGCTATGTTG GGAAGTCACT AGTTGAGAAT GTTCTTCCGA TCCTCTTAGT TGCGTTTCAT TGTGATTTGA CGCAGCTTCT TGATCAATGC ATAGAGAGAG TGGCTAGATC AGATTTAGAC AGATTCTGCA TTGAAAAGGA GCTTCCTTTC GAAGTATCGG AAAAAATCAA ACAGCTTCGA GTTAAGTCGG TGAACATACC TGAGGAGGTG GATAAATCGC TAGAGAGAAC CGGGAAAGTA CTCAAGGCAT TGGATTCAGA TGATGTGGAA CTCGTGAAGC TTCTTTTGAC TGAGTCAGAT ATAACTCTAG ACCAAGCCAA TGGTCTGCAT TATGCAGTGG CTTACAGTGA TCCGAAAGTT GTGACCCAGG TTCTTGATCT AAATATGGCT GATGTTAATT TCAGAAATTC CAGAGGGTAT ACAGTTCTTC ATATTGCTGC TATGCGTAGA GAGCCAACAA TTATTATACC ACTTATTCAA AAAGGAGCTC ATGCTTCGGA TTTCACGTTT GATGGACGCA GTGCGGTTAA TATATGTAGG AGACTCACTA GGCCAAAAGA TTATCATAGC AAAACCTCAA GGAAAGAACC TAGTAAAGAC CGCTTATGCA TCGATATCTT GGAAAGGGAA ATTAGAAGGA ATCCATTGGT TAGTGGGGAT ACACCCACTT GTTCCCATTC GATGCCCGAG GATCTCCAAA TGAGGTTGTT ATACTTAGAA AAGCGAGTGG GACTTGCTCA GTTGTTCTTC CCAGCAGAAG CTAATGTGGC CATGGACGTT GCTAATGTTG AAGGGACAAG CGAGTGCACA GGTCTTCTAA CTCCACCTCC ATCAAATGGT ACAACCGGAA ACTTGGGTAA AGTCGATTTA AATGAAACGC CTTATGTGCA AACGAAAAGA ATGCTTACAC GTATGGAAGC CCTCATGAAA ACAGTTGAGA CAGGTCGGAG GTATTTCCCA TCTTGTTCTG AGGTTCTTGA TAGGCACATG GATGAGTATA TGGACGAAGA CATCCCTGAT ATGTCACATC CCGAAAAAGG CACTGTGAAA GAGAGAAGAC AGAAGAGAAT GAGATATAAC GAGCTGAAGA ACGACGTTAA GAAAGCGTAT AGCAAAGACA AAGAGGCCAA GATCGCGCGG TCTTGTCTTT CTTCTTCATC ACCAGCTTCT TCTCATAGAG AAGCCTTAGA GAACCCAACA TAA 
Length1743
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9437433.. 9439435
Download Sequence
A.thaliana
AGI-codeAT4G19660.1
DescriptionNPR1-like protein 4
TAIR curator summaryEncodes a ankyrin repeat BTB/POZ domain-containing protein with 36% sequence identity with NPR1. Mutants are more susceptible to the bacterial pathogen Pseudomonas syringe pv. tomato DC3000 and to the fungal pathogen Erysiphe cichoracearum, but do not differ markedly from wild type in interaction with virulent and avirulent strains of the oomycete Peronospora parasitica. NPR4 is required for basal defense against pathogens, and may be implicated in the cross-talk between the SA- and JA-dependent signaling pathways.
Alias[ATNPR4][NPR4][NPR1-like protein 4]
Gene coexpression
MR
MR Locus Description
7.07107 Ahg484193 ammonium transporter 1;1
7.74597 Ahg340841 agenet domain-containing protein
12.6491 Ahg352825
12.9615 Ahg329070 MAP kinase/ ERK kinase 1
14.4914 Ahg488150 Auxin-responsive GH3 family protein
20.0499 Ahg482304 Protein kinase superfamily protein
22.9129 Ahg486080 WRKY DNA-binding protein 70
24 Ahg482717 adenosine kinase
27.6406 Ahg480605 Protein kinase superfamily protein
27.8209 Ahg949816 dentin sialophosphoprotein-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression