Detail



ID : Ahg890597

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890597|Al_scaffold_0007_2583
Sequence
ATGAAAACGT TAATATCTTC TTCTCTGTCT CACAAATCCC ACTCTCAGAT CCTCTGCTTC TCTCTGAATA AACTTGCCAT GATTTACTCT CAGAAGTTGT TACAAACAGA GGCCTCTCAG TCGTCGGCTT CCGGTCCTAT GTTTTCCGGC AATGCGACGG CGATCCTACG CCGGATGCTA GCGGAGAGGA GAATTGGCAG CTTTCAGGTG GAGAATCAGA GAAAGAAAGA GAAGTTAGAT AAGACATTAA AGGGTCTGTG TGTCACTGGG AGATTGAAAG AAGCTGTTGG GTTGTTATGG CGTAGCGGGT TGCAAGTCGA GCCTGAGACT TATGCTGTGC TGTTGCAGGA ATGTAAACAA AGGAAGGAAT ATACAAAAGG GAAACGGATT CATGCTCAGA TGATTGTTGT AGGATATGCT CCCAATGAGT ATTTGAAAGT TAAGTTGTTG ATACTTTACG CCTTAGATTT GATCCCGTGG AATGCGATGA TATCTGGGTA TGTGCAAAAG GGTCTTGAAC AAGATGGGCT TTATATTTAT TATGATATGA GACAGAACGG AATAGTTCCT GATCAGTATA CTTTTGCTTC AGTGTTTAGA GTTTGTTCTG CGTTAGCATC GTTGGAACAC GGTAAGAGAG CTCACGCTGT GATGATAAAG AGACATATTA AGTCGAACAT TATAGTTGAT AGTGCCCTTG TTGATATGTA CTTTAAATGC AGCAGCTTCT CTGATGGCCA CAAAGTATTT GATCAATTGT CCACTAGAAA CGTTGTTACG TGGACCTCAT TGATGTCTGG CTATGGATAT CATGGAAAAG TTTCAGAGGT GTTAAAATGC TTTGAGAAGA TGAAGGAAGA AGGTTGTAGA CCAAATCCGG TTACATTTTT GGTGGTTCTC ACTGCGTGTA ACCATGGAGG TTTAGTTGAT AAAGGTTGGG AGCATTTCAA TTCTATGAAG AGAGATTACG GGATTGAACC TGAGGGACAA CACTATGCAG CTATGGTTGA TACGTTAGGG CGTGCTGGTA GGCTACAAGA AGCGTACGAA TTTGTAATGA AGTCACCATG CAAGGAGCAT GCTCCGGTAT GGGGTTCTTT ACTTGGGGCT TGCAGGATTC ATGGGAATGT GAAACTGCTA GAACTCGCAG CTACAAAATT TTTGGAGTTG GATCCAACGA ATGGGGGGAA TTACGTGGTG TTTGCCAATG GATACGCGAG TTGTGGATTC CGTGATGCTG CTTCAAAGGT TAGGAGGAGG ATGGAGAACG CAGGAGTTAA AAAAGATCCC GGGTATAGCC AGATCGAATT ACAAGGGGAA GTTCATAGAT TCATGAAGGA TGATACGTCT CACAGACTCT CAGTAAAGAT ATACAAGAAG GTCCACGAGA TGACTTCATT CTTTATGGAT ATTGACTACT ATCCAGATGA CTTAGACTCT TGCTGTCCTG TTTGA 
Length1455
Protein Sequence
Protein Residue
Map Locationscaffold_7: 11292848.. 11293846
Download Sequence
A.thaliana
AGI-codeAT4G16470.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
34.1467 Ahg932772 haloacid dehalogenase-like hydrolase family protein
51.2348 Ahg920873 Pentatricopeptide repeat (PPR) superfamily protein
51.4781 Ahg470231 galacturonosyltransferase 5
53.3667 Ahg941038 Ribosomal protein S19e family protein
57.9396 Ahg336805 Tetrapyrrole (Corrin/Porphyrin) Methylases
63.7966 Ahg892739 nucleic acid binding;ATP-dependent helicases;ATP binding;helicases;ATP-dependent helicases
64.1093 Ahg492954 chromomethylase 2
70.5691 Ahg938452 Cleavage and polyadenylation specificity factor (CPSF) A subunit protein
74.458 Ahg919092 myosin XI B
98.1428 Ahg333105 3-ketoacyl-CoA synthase 20
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression