Detail



ID : Ahg890784

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890784|Al_scaffold_0007_2770
Sequence
ATGGGGAGAT TGAGATTAGC GTTTTTGGCG GTCTCTCTCG TTGTTTTCGT TTGTGTTTCC GAGGAGATTT TCTCTCGAGA CGGTGCAAAT CTCTTTCGAT TCTCCGTATA TCGAAACTCT ATCGCAGAGC AAACATGGAT TCATCAAAAT CCGAGAAGGA AGCTGATCAG TTATCCAAAA AAGTTTAGTG TCTCTGCTCC AAATTTAGCT TCCGGTCCTG CACCGGGTTT CGCGCCTGGA CCTGGGCCAA GTTTTGCGCC AGGTCCTGCA CCGAATCCTC GTAGTTATGA TCTCGTAGCA CCTGCAAGTT CTCCAAATGA ACCTCCAGCT GAGACACCGG ATGAATCGAG TCCCGGTCCA AGTGAGGAGA AACCGAGTGT TGTTGCTCCT AGTCAAAGTG TTCCGGGTCC TCCTCCTCCA CCACGAGAGA AGAAGGATGA TGTCTTGATG AAACTTATCA TAGCTGTTGC TTCAACCGCT GTTTTAACGT TTGTTCTTGT TGCATTGATG TTCTTGTGTT GTTTCAAACG CAATCGCAAC AACGCGGTTG GGCCTAGAGA TGGACCAAGA GATGAAGGAC CACTTCTACG TTTATCAACT GGATCTACTG AGAACTCGCC CACCGTCGCA AGCACGAGCC GGAAAATGTT TAGTGCTACT AGTTCGAAAA AGAGGTCGTT TCTTTCTAGA GTATCTTTTA AAAGAAATGG TCATGAATTT TCAACGGCTG AATCTTCATC GGCTGGACTT CCTCCATTGA AGCTTCCCCC GGGAAGATCA GCGGCTCCTC CTCCTCCTGC TCCTGCTCCA CCTCCACAGC CACCGCCTCC TCCTCCACCT AAACCACAAC CTCCTCCACC ACCTAAAATT GCTCGTCCTC CACCTGCACC ACCAAAAGGT GTGGCTCCAA AACGTCAAGG ACATACTTCC TCTGGAGATG CATCTGATGT TGATTCTGAG ACTGGAGCTC CAAAAACAAA ACTAAAGCCG TTCTTCTGGG ATAAAATGGC CAACCCTGAT CAGAAAATGG TTTGGCATGA GATTAGCGCC GGTTCATTCC AGTTCAACGA AGAGGCGATG GAGACGCTTT TCGGTTACAA TGATGGTAAC AAAAACAAGA ACGGTCAGAG GAGTACCGAT TCGTCGTCAC GCGAATCTCC TGTTCAATAT ATACAGATAA TTGACACTAG GAAAGCTCAA AACTTATCTA TTCTTCTTCG AGCTTTGAAT GTAACAACAG AAGAAGTCGT CGATGCAATC AAAGAAGGTA ATGAGCTCCC AGTGGAGCTT CTACAAACAT TGCTGAAGAT GGCTCCAACA TCAGAAGAAG AACTCAAACT TAGACTATAC TCGGGCGATC TTCACTTACT TGGCCCCGCG GAACGATTCT TGAAAATTCT TGTTGATATA CCTTTTGCAT TTAAACGTAT AGAGTCACTT CTATTCATGA TCTCACTTCA AGAAGAAGTC TCTGGCCTCA AAGAAGCTCT CGCAACTCTC GAGGTGGCTT GCAAGAAACT TAGAAACAGC AGACTGTTTC TAAAACTACT AGAGGCAGTT CTCAAGACAG GAAACCGAAT GAATGTAGGA ACTTTCCGCG GTGATGCGCA GGCTTTCAAA CTCGATACTC TTTTAAAACT CTCTGACGTC AAGGGAACTG ATGGCAAAAC TACACTTTTA CATTTCGTTG TTCTCGAGAT CATTCGTTCT GAAGGCGTTC GTGCTCTTCG CCTTCAGAGC CGAAGCTTCT CAAGTGTTAA AACAGATGAT TCAGTAGCGG ATTCTAGTCC ACAATCAGTG GAGCGTTACC GAAGCACGGG GCTTCAGGTG GTTACGGGAT TAACAACAGA GCTTGAAGAT GTCAAGAGAG CAGCCATCAT AGACGCTGAT GGATTGGCTG CAACATTGGC AAATCTAAGT GGCTCGCTTA CGAATGCAAG GGAGTTTTTG AAAACGATGG ACGAAGAGAG CGATTTCGAA CGAGCATTAG CTGGATTTAT AGAACGTGCA GATGCTGACA TCAAATGGTT GAAAGAAGAA GAAGAGAGAA TAATGGTGTT GGTGAAAAGC TCTGCTGATT ATTTCCATGG GAAATCTGCG AAAAACGAAG GGCTACGTTT GTTCGCTATA GTGCGCGATT TCTTGATTAT GTTGGAGAAA GTTTGCAGAG AAGTTAAGGA AACAACGAAG ACGAAGAACC ATTCGGGTAA GAAGGAAACT GATACGATGT CTTCAGACAG TAATCAACCG TCTCCGGACA TTCGACAACG TTTATTTCCA GCGATTGCTG AACGGAGAAT CGACAGTTCG GATGATTCAG ACGATGAGGA AGATAGTTCA CCTTCTTAG 
Length2349
Protein Sequence
Protein Residue
Map Locationscaffold_7: 12382915.. 12385741
Download Sequence
A.thaliana
AGI-codeAT4G15200.1
Descriptionformin 3
TAIR curator summaryActin nucleation factor that directs the formation of actin cables in pollen tubes. Involved in cytoplasmic streaming and polarized growth in pollen tubes.
Alias[AFH3][FH3][formin 3]
Gene coexpression
MR
MR Locus Description
47.5184 Ahg947612
62.546 Ahg473001
95.5458 Ahg494865 Pectin lyase-like superfamily protein
97.7241 Ahg908287 F-box family protein
98.2446 Ahg341831
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression