Detail



ID : Ahg890967

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|890967|Al_scaffold_0007_2953
Sequence
ATGGAACTTC AGGGAAAGAA GGAGATAGAA GTTGTTCCTA TTTTCTACGG AGTTAACCCC TCTGACGTGA GAAATCAGCG AGGAAATTTC GCTTTAGAAA GGTACCAAGG TTTAGAAATG GCGGACACGG TTCTTGGATG GAGAGAAGCA CTTACGCGTA TCGCCAACCG AAAGGGCAAG GATTCCACAC AATGCGAGGA TGAGGCCACC ATGATTGAAG ATATTGTTCG ACGTATTTCA AGCCGATTGT TATCTATGTT GCCAATAGAT TTTGGTGATA TTGTCGGGAT GAAAACTCAT GTGGAAGGTC TCAGTCCTCT CTTGAACATG GACGCCAATG ATGAGGTTCG TATGATAGAA ATATGGGGAA TGGGTGGCAT TGGCAAAACC ACCATAGCTA AGTACATTTA TGAACAATAT AAACACAGAT TTTCGCCTCA TTTTTGTTTC ATACCAAACG TTAGGAAAAT TTCCTCAAAA CATGGTCTCT TGTACTTACA AGAAAAGCTT ATTTCCAATA TTCTTGGTGA AGAACATGTA AAATTGTGGA GTGTGGAACA GGGTGCTCAT TGTATCAAGT CAAGGCTTGG ACACCTGAAA GTTTTTATTG TCCTTGATGA TGTGGATGAT GTGAACCAGC TGTATGCACT GGCTAAAGAG GCTAAATGGT TTGGACTAGG GAGTCGAATC ATTGTAACAA CACGGGACAA GAGCTTGCTT AACAACTTCT GTGGAGTAAG AATATTTGTG TACGATGTTA AGTGCATGGA TAATGATAAT GCCATCAAAC TCTTTGAGCA GGTTGCTTTT GAAGGAGGAC ATCCTCCTTC TCATGTCTAC AAAGATCTCT CAAATCGTGT TTCAAGGCTT GCACAAGGTC TTCCTTTGGC CCTTGAGGCT TTTGGCTTTT ATCTTCATGG CAAGTCCCTA ATGGAGTGGA AAGATGGTTT AAAATCGTTT GAGGAAGCTC CTTACGAAAA CATTATGAGT ATCTTGAAAA TTAGCTATGA TAACTTAGAC GAACTTGGTA AGACTGCTTT TCTTCATGTC GCATGTCTTT TCAATGGAGA ACCAGTCTTG CGAGTCACAA CCCTTCTTGA TTGCGGTCGA TTTGGAATTA GAGATTTAGT GGAAAAGTCT CTCATTGACA TATCAACTGA TGGGTGTATA GCTATGCATG GTTTGGTAGA GCAAACGGGA AGACATATTG TGTGTCAAGA ATCTGGCAAC AGACCTGCCA AACAACGCAT CCTGTGGCAT CCTGACGACA TATATAGAGT ACTAGCAAAC TATGCTGGTA CAAGAAAAAT TGAAGGCGTC GCACTAGATG TTTGTGTACT GCCCTACAGT TTTCATATTG AGTGGAATGC TTTGGAGCCA ATGTATAATC TCAAATTTCT GAAAATTTAC AAGCATTCTA AAGGTTCAGA GTCCAGAATA CGACGCAATC TAGAGGAAAA TCCGATAGTT TCTCGTAAGC TTAGACTACT ACATTGGGAT GCATATTCTT ATACAACATT GCCTTCAAAA GTTAGTCCAG ATTGTCTTGT TGAACTAAAT CTTTGTTACA GCAAGCTCAC AAGCCTTTGG AGTGGAGTCC CAAGACTTTT GCATCTGAGG AGGCTAGATC TGACAGGCTG TGAGGATTTG AAAGAACTTC CAGATCTTCA TGAAGCAGTG TGTCTCGAAG AGTTGATACT AGAAGGTTGC ATTTCCTTGC AGCGGATTCC AAAGTCTATA TGGGGCTTAT CTAGACTGAA GAAGCTTGAT GTGTCCAACT GTGATGGGCT TAAGAATCTA AGGATCATAT TAAGGGAATC TGAGTCTACT GTCTTTCAAA GCAGCATCTC TGGAATGTGC TTGCACGTTA GATTAATCCA CATGGAAGTT CTTGATCCAA CACCGTATGA ATTCGAGGGG ATTTCCATTC CAAACCTATC AATCAATGGT GAAATAAAAA TCAAGTTGGA GCTTCTTGAA GGATACGCAG AGCATCTCTG TTTTCTTTCG GAGCAAGAGA TCCCCCATGA ACTAATGATG TTGGAAAATC AAACACCTAA GCTCATGTCA TCTCCCTACA ATTTTAAATC ACTCGACATC ATGCGGTTTA TCTGCAGTGA GAGAAGCAAT CTTTTCAAGT GTTATAGCTT TTCAGATTTT CCCTGGCTGA GAGACTTAAA TCTGATCAAC CTAAACATCG AAGAAATCCC AGATGACATT CACCATATGA TGGTTCTAGA GAAATTAGAC CTCAGTGGCA ATGGCTTCAG AGTGTTACCA ACGACGATGA TTCTTCTTAC CAATTTGAAG CATTTGACGC TTTGTAACTG CTGTCGACTC GAGACATTGC CAGACCTATA CCAGCTGGAG ACACTCACTC TTTCTGATTG TACAAATCTC CAAGCATTGG TGAACCTTTC TGATGCACAA CAAGATCAGA GCAGATATTG TCTGGTTGAG CTTTGGCTTG ACAACTGCAA GAATGTTCAA TCTTTGTCTG ATCAACTTAC TCGGTTTAAA AGTTTAACAT ATTTGGATAT CAGCAGACAT GATTTTGAAA CAGTACCTAC AAGCATCAAG GATCTCCCCT TGTTGGTAAC TCTTTGCCTC AATTATTGCA AGAAACTCAA ATCACTAAAA GAAGTACTTC CATTGAGCCT CAAGTATCTA TATGCGCATG GTTGCAAGTC CCTGGATGCT TTTATTGAGT ATCATGTTCA TCACCGTGAT CTTAGCCCGT GCTTACAGTG GAAGCAAGAT TCTAGTCAAA TCACTCGGTT TCCAGCTGGA AGACGTAGTG AAGAGGTAAC AATCTTTTGC TATCAATTTT TCTATGCATT AGCTAAGTTC TTTTTGTTTC CTTTTATAGG TACCGATATG TGCTTGCTTC CAGGATTCTA A 
Length2901
Protein Sequence
Protein Residue
Map Locationscaffold_7: 13534177.. 13537391
Download Sequence
A.thaliana
AGI-codeAT5G48775.1
Descriptionother RNA
TAIR curator summaryPotential natural antisense gene, locus overlaps with AT5G48770
Alias
Gene coexpression
MR
MR Locus Description
10.8628 Ahg952201 succinate dehydrogenase 2-3
11.0454 Ahg911036
15.0997 Ahg946698 Maternally expressed gene (MEG) family protein
33.1662 Ahg358227
35.0714 Ahg483007
43.8178 Ahg359094
45.607 Ahg493651
51.225 Ahg491636 Wall-associated kinase family protein
55.857 Ahg945486 Protein of unknown function (DUF295)
58.1464 Ahg905807
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression