Detail



ID : Ahg891275

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891275|Al_scaffold_0007_3261
Sequence
ATGGAAGGAA AAACAGTGAT CTCAAGTCTG CTCATAATGA GGCTTGTCTT GACAAAGATT CAAGTAGAAG CAAAAAAACT CTGCTGTCCT AACCAGACTG CTAGATCTAA ATATCTATTA TGCATTAGGA GGCCATCCCC AGAACATTGT CTAGCATTGA GTACATGCAA AATTATTTCT GGGAATATAT GTCCTCCGGG ATATACAAAT GACATTCATG AAAATTCTGG TGATGCTGTC AATGAATATT GCGAGTTGGG GTGTGCATCC TCTGTGTGTG GTGCCTTGAC TACTCTCCAA AACTCGGACG CAAGTAAAGC TTTGAGTGAA GCGGTTGAAC TATGCGCCAA GGCATGTTCT ACTGTCTGCA CCGGAGGATC TACGGCCGCA ATTAAAAGTG CTTAA 
Length405
Protein Sequence
Protein Residue
Map Locationscaffold_7: 18576604.. 18577204
Download Sequence
A.thaliana
AGI-codeAT5G36910.1
Descriptionthionin 2.2
TAIR curator summaryEncodes a thionin that is expressed at a low basal level in seedlings and shows circadian variation. Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660.
Alias[THI2.2][thionin 2.2]
Gene coexpression
MR
MR Locus Description
7.2111 Ahg922725
11.6619 Ahg925866
14.2829 Virus1824
15.4272 Ahg936194
16.4924 Virus0631
16.4924 Ahg497499 Protein of unknown function (DUF784)
16.4924 Ahg937678
16.4924 Ahg355565
16.4924 Virus0002
23.3238 Ahg942890
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression