Detail



ID : Ahg891573

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891573|Al_scaffold_0007_3559
Sequence
ATGGCTTCTT CTTCATCTTC TTCACCGTCT GACTTCAAGA GATACCATGT CTTCTCGAGT TTCCACGGCC CAGACGTCCG TAGTGGATTT CTCAGTCATT TACACAATCA CTTCGAAACC AAAGGGATCA CTACGTTCAA CGATCAGGAG ATCGAGAGAG GCCATACGAT CGGACCTGAG CTCGTGCAAG CGATTAGAGA ATCTAGAGTC TCGATTGTGG TGCTCTCGGA GAAGTATGCT TCTTCGGGCT GGTGCTTAGA TGAGTTGGTG GAAATCTTGA AGTGCAAAGA AGCTTCGGGG CAAGCTGTGA TGACTATTTT TTACAAAGTT GATCCGTCTG ATGTACGGAA ACAGCGGGGA GATTTCGGAT ATACTTTCAA GAAAACTTGT GAAGGGAAAA CAGAGGAAGT GAAGCAGAGA TGGAGCAAAG CTTTGACTGA TGTAGCAACC ATAGCTGGAG AAAACTCTCT AAACTGGGCT AATGAAGCAG AGATGATCCA AAAGATTGCT ACAGATGTTT CAAACAAACT TAATGTCACT CCGTCCAGGG ATTTCGAGGG GATGGTGGGA CTTGAAGCTC ACCTAACAAA GCTAGACTCT TTTTTATGCC TTGAGAGTGA TGATGTGAAG ATGATTGGCA TTTGGGGTCC TGCTGGAATT GGTAAGACTA CCATTGCTAG AGCTTTATTT AACCAACTCT CTACCCATTT TCGGCGTAGT TGTTTTATGG GGACCATTGA TGTTAATGAC TATGATTCGA AGTTGTGTTT GCAAAACAAG CTTCTGTCCA AAATTTTGAA CCAAAAGGAT ATGAGGGTAC ATCATTTAGG TGCAATAAAA GAATGGCTTC ATGACCAAAG AGTGCTTATA GTTCTTGATG ATGTGGATGA TCTAGAGCAA CTAGAGGTAT TGGCTAAAGA AACTTCTTGG TTCGGTCCTG GAAGTCGGAT CATCGTTACC TTGAAAGATA AAAAGATTTT GAAGGCACAT GGGATCAACG ATATCTACCA TGTGGATTAT CCTTCCGAAA AAGAAGCTTT TGAGATATTT TGTCTTTCTG CTTTCAAACA AAGTTCTCCA CAAGATGGTT TTGAAGAGCT TGCAAGAAAA GTAGTAGAGC TTTGCGGTAA TCTTCCATTG GGCCTTCGTG TTGTGGGTTC TTCTTTTTAT GGGGAGAGCG AGGATGAATG GAGGATTCAA TTATATGGGA TTGAAACTAA TCTTGATAGA AAAATTGAGA ATGTCTTGAG AGTGGGATAT GACAAATTGT CAGAACGACA TCAATCTTTG TTTCTTCATA TTGCATGCTT TTTCAACCAT AAAAGTGTTG ATTATGTGAC AACCATGCTC GCTGACAGTG TTTTGGATGT CGAAAATGGG TTGAACACCT TAGCCGCTAA ATCTCTTGTG TCTACTAATG GGTGGATAAC GATGCACTGT CTACTACAAC AATTGGGTAG ACAAGTTGTT CTTCAACAGG GCGACCCGGG GAAACGTCAG TTTTTAGTAG AGGCCAAAGA GATTCGCGAT GTCTTGGCAA ATGAAACAGG TACTGAATCC GTCATAGGTA TATCATTTGA TATTTCGAAG ATCGAGGCGT TATCTATAAG CAAGCGAGCC TTTAATAGAA TGCGTAATCT CAAATTCTTA AATTTCTATA ATGGAAATAT TAGCTTGTTA GAGGACATGG AATATCTACC TCATCTAAGG TTACTTCATT GGGGTTCATA CCCGAGAAAA AGTCTTCCTC TGGCATTTAA GCCAGAATGT CTCGTCGAAC TCTATATGGG ATCCAGCAAG TTGGAGAAGC TATGGGGAGG AATCCAGCCC CTTACAAATC TAAAGAAAAT AAATTTGGGA TATTCCTCTA ATTTGAAAGA AATCCCAAAT CTTTCGAAAG CCACTAACCT CAAGACGTTG ACACTTACCG GTTGTGAGAG TTTGGTGGAG ATTCCATCCT CTATTTTGAA TCTACAGAAA CTGGAAATGC TGTATGCGTC AGGGTGCTCT AAGCTACAAG TTATTCCCAC CAACATCAAC TTAGCATCTC TTGAGGAAGT CAACATGAGT AATTGCTCAC GTCTGAGAAA TTTTCCAGAT ATGTCTAGTA ACATCAAGCG TCTCTATGTA GCAGGCACAA TGATTAAAGA ATTTCCTGCG TCCATTGTTG GACAATGGTG TCGTCTTGAT TTTCTTCAGA TAGGCAGCAG AAGCTTCAAG AGATTAACAC ATGTCCCAGA GAGTGTAACA CATCTAGACC TACGCAACAG TGATATAAAG ATGATTCCAG ATTGCATCAT AGGTCTCTCG CATCTAGTAT CTCTTCTCGT CGAAAACTGC ACAAAACTGG TGTCAATTCA AGGTCATTCC CCTTCGCTGG TGACCCTATT TGCAGACCAC TGTATATCAC TCCAGAGCGT ATGCTGCTCT TTCCACGGAC CAATCTCGAA ATCGATGTTC TACAACTGTC TGAAACTGGA TAAGGAATCA AAAAGAGGAA TCATACAACA ATCGGGTAAC AAGTCTATAT GCTTGCCAGG TAAAGAAATC CCTGCGGAGT TCACTCACCA AACTTCAGGG AACTTGATAA CCATCTCTCT GGCTCCAGGT TGTGAGGAGG CTTTTTCTGC GTTCTCAAGA TTTAAGGCTT GCCTTCTGCT TTCGCCAATC AAGGATTTCG CATTTAATAA GATAAATTGT ATTCTAAGAA GCAGAGAAGG TGTCAAAATT AACTGCACTA CAGAGTCCAT ATATCCATTT GTGTCTGGTG GATCTCTATC AGAACATCTG TTTATCTTTT GTGGCGACTT ATTTCCTGAA GAAAACAGAG GCCTCATGGA CGTGACTCCG AACGAGATTC TGTTTCATTT CAGCTCCAGT GATGTCGAGA TTATGGAATG TGGTGTAAAG ATCTTTTTGA GTAGTGGCAT CGAAGTGGGC TACTCTGAAA CTGGAGGCAA CAGAAACCAC CACATAGATG GAGAAGCAGA AGCGTTTAAG GTGGCTCAAG TTGAAAACAG TAAACATACA GGCCACTGGA GTTGGCTTAG GAAGCTTCGT CTGGGGAAGA ATAATAAGAC AGAGCTTAGT TCGAGAGCAG TCTCAGGATC CAGTGATGAT ACTCGGGGAA TCTCCATGAG GTATCTTGAG CATGAAGCTG TTGAGCTCAC TAAAGATGAA AGCATCACAG ATCTTTTCCG TTTGCTATGT ATTGGTTCCC TTGCGGTCTG TGTTTTCTTT TCTGTTTATT TTGGGCAACC CCTTGTGGTC TCTGTTTTGT TGCTTTTTTA TTGCTTGTTT CTTCAATTGC AATGA 
Length3315
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20553682.. 20557216
Download Sequence
A.thaliana
AGI-codeAT5G40910.1
DescriptionDisease resistance protein (TIR-NBS-LRR class) family
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
28.3373 Ahg934176
29.1548 Ahg488886 PRLI-interacting factor, putative
35.9166 Ahg345481 conserved peptide upstream open reading frame 52
38.8072 Ahg479013 DNA photolyase family protein
54.4426 Ahg344726
74.3572 Ahg347467 Copper amine oxidase family protein
77.9359 Ahg323966
78.8353 Ahg312743 SU(VAR)3-9 homolog 7
80.7465 Ahg897322 Seven transmembrane MLO family protein
86.1162 Ahg485729 ABC-2 type transporter family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression