Detail



ID : Ahg488886

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488886|fgenesh2_kg.6__2020__AT5G19900.1
Sequence
ATGAACGATC AATCTAAGCT GATGAATCCG CCTCCTCCAC CGCAAATGAT TGGTCAGCCT CCGCCGCAAC AGAGGATGAA TCCGCCGCTG CCGTCTTCTC AGGTACCACG GATTATGAAC CAGACTCCTA TGTTAGGCCA ATCTCATCCG ATTATGGGTA TGAATCAGCA GCCACAGGTT ATGATGAACA ACCAGCCTAT GATGATGAAT CCACGCAACT TTAACCTTAA CCCGAGTTTG AGTTCCGAGT ATCAGCAGAA TCTTCCTCCT AATAACTTTG TTTCGAAAAT GAGTCGGAAC AATTGGAAAG GGAAGAAGAT TACAAGTGAC AAGAGGCCAA TGATGGAGCA GCAGCCTATT AGGAGGATGC ATAACTCTGG GATCCCTATG TATAACCCTC AGCAACTACC TGGTTCTGGT AGTAGTAATC AGGTTGGTTA CAAGCCGCCG ACTTTGAACG AGCTGCAGTC TCAGAACAGG TTGAAAACCA GGAAGTTTTA CCCGAAGAAG AAGTATGGTA ATCGATATGT TCCTTATGCT CCGAGGAACA CGACTTCGTT TATCATCAGG GCGAAGAAAT CTGGTGGAAT TGCTGAGTTG GTGTCTCCAT GCCCTGTGAC ACCGGCGGTA TTGCCTACGC CAATGTTCTC GCCGTCCAGG GAGGTGTTGG GTGATATGGC GAAAGAGGAA TGGGGCGTTG ATGGTTATGG CTCCATGAAA GGGTTGATTA GGCTGAGAGC TGATGGAAAT GAGTTGGAAC CTTATGATGA GGATGATGAA GATGAAGGAG GGTCGAGTGA GAGTGATGTG GAGGAGCATG TTGAGGTTGA GAGGAGATTG GACCATGATT TGAGCCGGTT TGAGATGATT TATCCGAATT ATGGTGGTTC GGAGTATAAC AATGTTTTGG AAAACCGAGT GGATGATCAG GATAGCCATA TTGCTCAACT GGAGGAAGAG AACTTAACCT TGAAGGAAAG GTTGTTCCTG ATGGAAAGGG AGTTGGGAGA CATGAGGAGA AGATTACAGT ATCTCGAGAG GCGGGGTATG GTTGCTGAAG ATGCTAACGA GGAGGTTGTG GAGAATGAGT CTGAAAGTGA TGGTGATGAT ACAGGGGGAT CTGATGCACG TACTAGTGGT GAAACAAAGG AGAACCATGT AGCTGCAGAG GACATTTGTA TGCAGGATGT TGCAGCGAGG GATAATGAGG CTGCGGTGAA AGAAATCAAC AACAACAGCA AGAGCGTGGA TGGAGTTAAA GAGAACAAAC AATCGGTTGG TGTGGGAAGT TCTGGGGAAA GTAAACCTGA AGGTAAGGAA AAAGCTGAGA CAGATTTTCG GGAAGTTTCA GGGGAACAAT GCGAGGAAGC CAACCAAGGT ATGGATCAAA GTAAGGAAAG TGAAATGGGA ATTGAGAATG ATTCTGTTGG AAAACAATGA GCAGCCATAT GATACCTGGA CCAAGGAGGG AAGCAGACGA GAACCCATGA TGATAGGCAG TGGTAACTAA CTGGTGATGC AAAGTTGATG AATACCATTT TCACATTGAA ATAGTGTAAG TCTCTTATAT GCACAGGCGT CAATGATGGA TCTCTGCAGC AGCTCTATGA TGTATATGTC AAAATGTACT TGTCTTAGTA GGTGTAGTCT AGTTCTCTCA CCGCTTTTGG TACCAGAGTT TAGGAGGCCC GCTTTCACGG AGAAGTTCAT ATGAAGTCAT GGTAAGCTTG TTTTTTTATT TTTCTTTTCT GGTACATCTT GTTGATGATA AGATAGATTG TAGTTAAAGC AAGGTTCATT GTAGTGAAAG ACTTATGGAT GATAGAGTTT TATGTTTG 
Length1838
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8033721.. 8035614
Download Sequence
A.thaliana
AGI-codeAT5G19900.1
DescriptionPRLI-interacting factor, putative
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg936615
3.87298 Ahg322516 cleavage and polyadenylation specificity factor 73 kDa subunit-II
5.56776 Ahg476418 Mitochondrial substrate carrier family protein
6.32456 Ahg483567 DNA-binding bromodomain-containing protein
6.9282 Ahg486507 alpha/beta-Hydrolases superfamily protein
7.93725 Ahg477858 RING/U-box protein
10.9545 Ahg936770 RS2-interacting KH protein
12.2474 Ahg489733 OSBP(oxysterol binding protein)-related protein 1C
15.0997 Ahg496596 TRICHOME BIREFRINGENCE-LIKE 14
17.4356 Ahg479152 response regulator 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression