| Annotation |
|---|
| Description | jgi|Araly1|891742|Al_scaffold_0007_3728 |
| Sequence |
ATGGAAGCTA CAGATGTTAA GGCTAGGTGT ATTCATTGTT CTGGATTGAT TTGTTGTAAG ACTAAAGATG GTGTCACAAC TAGTGCAATG GGAAAACACA TGAGAATATG CAAAATGATG CCTCGGGAAG TACCTTATGG TAGGGATTCT AAGCATCCTT CTGGACGTCT TGTTGATGCT AATGAAGACT ACGAAGCACG CCTGAAGGAG GAACCAGTTA TTGCGTTCAG TGGAGAGGAA GGCAATGGTC GGTACTTGGA CTTGCATGAG TACATCAACT CTAAATTTGG GGAAAGGGTT GAATACCGCG ATAAACTGAA GTTATCGAGG CAATACAGGA AGTATATGGA AGCTCTGCTA GAGTACTTGG TCTACTTTTT CCAGCGAACC GAGCCGTTGC AAGATCTTGA CCGGATACTT TCTAGCCGTT GCAAGATCTT GACCGGATAC TTTCTAGCCG TTGCAAGATC TTGA |
| Length | 474 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 21556598.. 21559128 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G06160.1 |
| Description | splicing factor-related |
| TAIR curator summary | Encodes a protein with similarity to pre-mRNA splicing factor SF3a60 that is involved in gametic cell fate determination. Loss of function results in the ectopic expression of egg cell makers suggesting a role in restriction of gametic cell fate. Expressed strongly in gametophytes and weakly in sporophytes. |
| Alias | [ATO][ATROPOS] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 13.6382 |
Ahg949730 | pfkB-like carbohydrate kinase family protein |
| 31.749 |
Ahg934426 | sulfate transporter 3;2 |
| 44.2267 |
Ahg475688 | microsomal glutathione s-transferase, putative |
| 46.5081 |
Ahg474716 | dehydrin family protein |
| 68.7895 |
Ahg917601 | phosphatidylinositol-speciwc phospholipase C5 |
| 70.1783 |
Ahg950455 | CBL-interacting protein kinase 21 |
| 71.5821 |
Ahg925985 | DNA-binding HORMA family protein |
| 80.4984 |
Ahg940862 | |
| 83.2766 |
Ahg890923 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein |
| 89.2468 |
Ahg474793 | Chaperone DnaJ-domain superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
|
|
| Growth Chamber expression |
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