Detail



ID : Ahg891920

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|891920|Al_scaffold_0007_3906
Sequence
ATGATGTCGC CGAAACAAAT CTCCGACGAT CGAGGATCTT CACATTTCAG GAATACTCCT TTCCAGATAA TCCACCTTAT TGGGAACTTT TTTAGGATAT GGTCAGTTTA TTCTATGTAC CGATACTTGA ATCAGACGGG AGCGCCTGTT GTTCTCTTTC TCTTCTGCTG TTTGGTGCCT TCATCTATCA TCTTCTTGAT ACTTCAAAAA CCATGGAAAG GAAGGGCACT TTCTAATCAA CAGATTGTAC CTTCTCTTAT CAATGGAGTC ATCACAGCTC TATACTTCAT CTTATGGGGA AAAGGTCTCA AGTCTTGTGG ACCTCTTAGA GCTATCTTAT CAGAGTACTC TGGTGCTGTT CTTGGAGTAC TTTCTGGAGT ATTGTATGGA CGGAGAGGTC ATGTGTGGAA AAAGGTAGGT GGCCTCATTG CAATGTTGGT AGCTCTTTTT TTCTTGTCTC AAGGATGGGC GACATCATCT CTCTCCCCTT TTTATATCCT TTTACGCAAT ACTGAAACCA AAGAGGAAGA AGTACAAACA GAACAGGCAC TAGGTATGAT GGGAATGATG ATACCAGTTT TTGCTGGAAT CTTATCAGCG TTAAGGCGGG TTATCGCGCG CCGTGTTTCT CTAAAGAACC AGCAGAAGAA ACGACTGCAT GCGATAACCA TTACTTCTGC AACCTGTTTC TTGTTTCCTG TGGCTATGTG GGACCTTATC ATAGGGTCAT CTTCTGGGAA AACATCCGAG TTGCCATTTT CTGCGTGGGC TTTCCTTAGC ACCATTGTTT TCGGAATCAT CCTAATATTC TATGTTGACA ATATCGCAGA AGAGAGATTG CATATGGTGT TTTCTTCGCC GAGGCATTTA ATGGTAGCAG GTGCTTGCAT AATAGTCATG GAGTTAGCTT ACGAGATGGA TTTTTCTCTT GCCGGTTTCA TCGTCTGTTG CTTAGTATTA GGGTTTGGAA TATTCGAGGC AACATCTCTC GAACGTAGCA AGAAAGACTC TTCGTTGAAA TCAGAAGATC CATCAAACGG AATCCTTGGT AATAATGACT TTGATACTTC TCCAATTCTT CCCATATAG 
Length1089
Protein Sequence
Protein Residue
Map Locationscaffold_7: 22548254.. 22551067
Download Sequence
A.thaliana
AGI-codeAT5G38380.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
6.9282 Ahg936941 jasmonate-zim-domain protein 11
9.16515 Ahg911499 Ubiquitin domain-containing protein
16.2481 Ahg495882 Ubiquitin-like superfamily protein
19.7231 Ahg473574 Regulator of Vps4 activity in the MVB pathway protein
40.8167 Ahg903337 Protein of unknown function, transmembrane-40
61.041 Ahg897654
68.942 Ahg317312
72.4983 Ahg900004
73.2803 Ahg951726 tRNAHis guanylyltransferase
79.6994 Ahg492998 SCAR family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression