Detail


ID : Ahg892040

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|892040|Al_scaffold_0006_36
Sequence
ATGGAAAATA TCACCAAAAC TTTTCAGTAC GGAGGAGTCG AATGGCTTTG CGAGCCATGG GTTGGTGCAG GCTCCTTGGG GATTGGCCGG GGAGAGAATC CGCTCAAGTT TGCTCTTCCT CTTCTTCTCC TTCAGATATC TGTCTTTACC ATATTTTCCG TATCTCTTCA GTTTTTTCTC CGGCCTTTCG GAAAATTTGC ATTCCTCACT CAGATGCTGG CTGGGATCTG CTTAGGACCG TCCGTTATAG GACGTAACAA ACAGTACATG TCTACATTTT TCTACACGAG AAGCGTGTAC ATAATCGAAT CCTTCGAGGC CATATGTTTT CTCTTCATTT GCTACATTAC AACATGTCAA GTAGACACTA GGATGATAAA GAGAGTAGGC AAGTTAGCAT TCATAAACGG CATCTTACTT TTCCTTATAC CTTTCGTATG GGGCCAATTC GCAGCCATCT TGATCTCCAA GAGGCTCGGA GGCGGGCCAG CGGGGATCCC TCCCGTGGAG TTCCACCACA TAGCGATCGT CGAATCCACA ATGTTTTTTC AGGTGGTTTA TGGAGTCTTG TCGAGCCTAA AGATGTTGAA CACTGAGCCA GGGAGGTTAG CACTTGCCTC CATGATGGTG CATGACTGCC TCTCATGGTG TTTTTTCATG CTTAACATCG CCATTAAACT TAATGTGGAC TTACCCAATA AAAATCGCGC TGCTTTCTTG TCCGTCTTAC AGATTTGTTG GTTTACCTTA CTTCTTTGGT GCGGTCGTCT TAGGTCTAGC CACCCCAAAA CGTCCGCCTC TAGGCACGGG ACTGTCAGAC AAAATCGGGT TGCCAAAATG ATAGCCATTG CCTTGCCTTC CCTTTACTAT AATGTGCCTC TTTGGCAGGC CATTCTTGTC GGGTTTATCG TCAATATCCA AGGACTTTAC GACGTTCAAA TATACAAACA GAATCTCAAT TACACGAAAA TATCAAGCAA ATCTTTTGGA GCAATGGTGA TGTCAGCAAC GGTAAACTCA ACAATTGTCA TAGTGATAGT GAAGAAACTG TATCAAACCA TGAGCAAACG CAACCCATAC AAGAGACGTA CGGTGCAGCA CTGCCGAGTG GGGGCTCCGC TAAGGATCCT CACTTGTTTC CGGAACCGTG AGGCGGTCCG CCCGGTGCTT GACCTCGTCG AACTCTCTCG TCCAGCCATC GGGTCTCCTC TCTCAGTCTT CGCTGTGAAT CTAGAAGAGC TTAATAACCA TAGTCTTCCT CTCCTTATTC ATCACACGCA AGAGATTAGT CCCTTCATCG TGCCTAGCCG AAGAGACCAG ATTGTTAAGG CCTTCCACAA CTTCGAGAAG ACTAATCAGG AGACCGTGTT GATAGAGTGC TTCACGGCAG TGGCGCCGCG AAAGACGATG CACGAGGATG TGTGTGCGAT TGCCTTTGAC CAGGAAACAG ATATTGTGAT CCTAACTCTT GATGCCGGGA TAGAGTCATG GGAGAGGCTC CTGTGTCGTA ATCTCCTGCA AAACTGTCCC TGCTCCGTTG CGCTTTTCAT AGACAGAGGA AGGCTTCCAG ATTTCAGGTT CGTTCCACTG AAAAAGCTCA CCATCAATAT CTGTGCTATC TTCTTAGGAG GACCAGATGA CCGTGAAATG CTTGCGTATG CAACACGCTT AGCCAGCCAT CCAAGCGTCG ATCTCCATGT CTTCCGGCTC GTGGACCAGA ACGGCGTCTC TCCGCTCAGA GACATGGTCG AGAGGAACCA CGACATGAGA GTCATCAACG TCTTCCGCAA AGAAAATTCC AAGAAAAACA TCATCTTCAG AGAGGTAAGA ATAGAGGAAG CAGTGGATCT ATTGGATCTA CTAAGGAAGG AAGGAGACGA CTTCGATCTG ATGATGGTCG GGATAAGACA CGAAGAAAAT CTTTTGATGT TGGAAGGATT GTCAGAATGG AGCGATATGA AGGAGTTAGG AGAGGTCGGA GATGTGTTGA TCTCCAAAGA TCTCGAGCTC TCTGTTTCGG TTCTCGCAGT CCAGCAATGA
Length2040
Protein Sequence
Protein Residue
Map Locationscaffold_6: 147688.. 150632
Download Sequence
A.thaliana
AGI-codeAT5G01690.1
Descriptioncation/H+ exchanger 27
TAIR curator summarymember of Putative Na+/H+ antiporter family
Alias[ATCHX27][CHX27][ARABIDOPSIS THALIANA CATION/HYDROGEN EXCHANGER 27][cation/H+ exchanger 27]
Gene coexpression
MR
MR Locus Description
26.2298 Ahg933363
30.5614 Ahg935860 MLP-like protein 328
40.4475 Ahg477612 Peroxidase superfamily protein
40.5463 Ahg945082 Galactose oxidase/kelch repeat superfamily protein
49.7996 Ahg934600 MATE efflux family protein
57.0263 Ahg903098
58.0259 Ahg336313 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
58.5662 Ahg895873
66.5132 Ahg891276
69.7137 Ahg949435
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression