Detail



ID : Ahg892601

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|892601|Al_scaffold_0006_597
Sequence
ATGAGATTTT CTCTTGCGTG GAAGCTCCTG TTCTTGATTC TAACTATAGC TTGTAAGCTC GAGACACAAG TGAAGTGCTT AGAGTTCAAT TTCCCTGGGT TTAATGTGAG CAATGATCTG GACTTGATCC GAGACAACTC ATACATTGTC CTTGGAGCAA TCCAAGTGAC TCCTGATGTT AGTGGTGGGC CTGGTGGCTC TATCGCCAAC CAAGCGGGCA GAGCTCTATA CAATAAGCCT TTCAGGCTAT GGAGCAAAGA CAAGAATGCT ACTTTCAACA CCACTTTCGT TATTAACATC TCGAACAAAA CCGATCCCGG AGGCGAAGGC TTAGCTTTCG TTCTCACACC CGAGAAGACC GCTCCTCAGA ACAGCTCAGG TATGTGGCTC GGTCTGGTCA ATGAAAGGAC AAACATGACT CTCGAGTCGA GGATCGTTTC TGTTGAGTTC GACACAAGGA AGAGCCATCC GGATGATATT GATGGAAACC ATGTGGCTCT AAATGTGAAC AACATCAATT CTGTTGTTCA AGAATCCTTG AGTGGTCGAG GGATCAAGAT CGATTCCGGA GTTGACTTAA CCGCTCATGT GCGGTATGAT GGTAAGAATC TATCGGTTTA TGTCTCTAGA AACTTGGAGG TGTTTGAACA GAGGAACTTA GTGTTTTCTA GGGCTATAGA TCTCTCAGCC TATCTTCCGG AGACAGTTTA TGTTGGATTT ACCGCTTCAA CAAGCAATTT CACGGAGCTG AATTGTGTGA GATCATGGAG GTTTGAAGGT TCAGAGATCG ATGGCGATGG AAACATGTTA TGGCTCTGGA TCACTATCCC TATAGTGTTT CTTGTTGTAA TAGGAGCTTT CTTAGGGGCA TTGTACTTGA GATCTAGGTC AAAGGCAGGG GAAACAAATC CGGATATAGA AGCTGAGCTA GATAATTGCG CTGCAAACCC GCAGAAGTTC AAGCTGAGAG AGCTGAAGAG AGCAACAGGG AACTTCGGCG TGGAGAACAA ACTCGGGCAA GGCGGGTTTG GGATGGTGTT TAAGGGGAAA TGGCAGGGTA GAGACATAGC TGTGAAACGA GTTTCCGAGA AATCGCATCA AGGGAAGCAA GAGTTTATAG CCGAGATCAC AACGATCGGT AATCTGAATC ATAGGAACCT GGTTAAATTA TTGGGATGGT GCTACGAGAG AAAGGAGTAT CTTCTGGTTT ATGAGTATAT GCCTAACGGA AGCTTGGACA AATATCTTTT CTTGGAAGAT AAGTCAAGAT CAAACCTAAC ATGGGAGACA AGGAAGAACA TCATAACAGG GCTATCTCAA GCTTTGGAGT ATCTTCACAA TGGATGTGAG AAGAGGATAC TTCACAGAGA CATAAAGGCA AGCAACGTAA TGCTAGACTC GGATTTCAAC GCCAAGCTCG GCGATTTCGG GCTTGCGAGG ATGATTCAGC AAAGCGAAAT GACACACCAT TCAACCAAGG AGATCGCTGG GACACCTGGG TACATGGCTC CGGAGACTTT TCTCAACGGG AGAGCCACAG TTGAAACAGA TGTGTATGCG TTTGGAGTTC TAATGCTCGA AGTAGTCTCA GGGAAGAAAC CTTGCTATGT CTTGGTCAAG GAGAACCAGA GCAATTACAA CAATAGCATT GTGAATTGGC TATGGGAGCT ATACAGAAAT GAAACCATCA TGGATGCAGC GGATCCGGGA ATGGGAAGTT TGTTCGATAA AGAAGAAATG AAAAGTGTTT TGCTCTTAGG ACTCGCTTGC TGCCACCCGA ATCCGAACCA AAGACCCTCC ATGAAAACGG TTTTGAAGGT CTTGACGGGT GAGACTAGCC CACCCGATGT TCCTACAGAG AGACCGGCTT TCGTGTGGCC AGCAATGCCT CCATCTTTCA GTGACATTGA CTACTCTCTT ACAGGGAGTC AGATCAATTC CCTTACCGAG CTTACTGGCC GATGA 
Length1965
Protein Sequence
Protein Residue
Map Locationscaffold_6: 2452867.. 2460176
Download Sequence
A.thaliana
AGI-codeAT5G06740.1
DescriptionConcanavalin A-like lectin protein kinase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
10.3923 Ahg472780 FAD-binding Berberine family protein
19.4422 Ahg483400 NAC domain containing protein 42
22.6495 Ahg902555 Plant invertase/pectin methylesterase inhibitor superfamily
24.4949 Ahg899102 RING/U-box superfamily protein
27.4955 Ahg482568 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
30.9839 Ahg476541 Calcium-dependent phosphotriesterase superfamily protein
37.55 Ahg489077
38.4708 Ahg472781 FAD-binding Berberine family protein
38.6782 Ahg889547 plant intracellular ras group-related LRR 8
40.4846 Ahg920350 Peroxidase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression