Detail



ID : Ahg893036

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893036|Al_scaffold_0006_1032
Sequence
ATGTCGTTAT TCCATCATCT TTTATCTCGT TCTCTTCCTT TATGGCATGT ATTTTTTCTC ACCTTCTTAG TATTACTCGG GAAATCTCAA AAGGAAGTTT TACAAGTTAA AGTGGGAATT GTTCTTGATA CTAATGTGAC ATTAGCAGAT TTGAGCTTAC GAGCTATCAA CATGTCTCTC TCGGAATTCT ATAGCACTCA TAATGGCTTC AAGACAAGGA TTGTCCTCAA CATCCGAGAT TCCAAACGAA CTGTTATTGG TGCTGCAGCT TCAGCTTTAT ACTTGATAAA GAAGAGGGAA GTGGTGGCCA TTATTGGACC AGGGAATTCA ATGCAAGCTC CATTTTTAAT CAACCTCGGA AATCAATCTC AAGTTCCCAT AATTTCATTC TCTGCGACAA GCCCTGTTCT TGATTCTCTC CGTAGTCCAT ATTTCATCAG AGCCACACAC GACGATTCGT CTCAAGTCCA AGCCATTAGC GCCATCATAG AGTCGTTTAG ATGGAGAGAA GTTGTGCCTA TTTATGTGGA CAATGAGTTC GGAGAAGGTA TTCTTCCTTA CTTAGTTGAT GCTTTTCAAG AGATCAACGT TCGTATCCGA TACCGAAGTG CCATATCAGC ACATTCCTCT GATGATCAAA TCAAGAAAGA GCTTTACAAA CTAATGACCA TGCCCACTAG GGTTTTTGTC GTGCACATGT TGCCTGATCT TGGATCGAGG CTTTTCTCGA TAGCAAAAGA GATTGGTATG ATGAATAAAG GATATGTATG GATTGTCACA AATGGTATAG CTGATCAACT GAGTCTAAAG GGGGAATCAA GCTTGGAGAA TATGCATGGT GTCTTGGGCG TCAAGACATA TTTCTCAAGA TCAAAAGAGC TAATGTATCT TGAAACTCGT TGGCGAAAAA GATTCGGAGG AGAAGAGATA AACAATTTTG AATGTTGGGC TTATGATGCG GCCACAGCAC TTGCAATGTC AATTGAGGAA ATCAGTAATG TACACATGAG TTTCAATAAG ACCAAAACAA ACACTTCAAG AGAAGATATA GGCACGGACC TTGATGATCT TGGCGTTGCT CTCTCTGGTC CCAAAATTCT TCAAGCATTG ACAACAGTCA GTTTCAAAGG TGTTGCCGGG AGATTTCAGC TAAAAAACGG AAAGCTAGAG GCGAAGACTT TCAAGATAGT CAATATAGAG GAAAGCGGGG AAAGAACAGT TGGATTTTGG ATATCAAAAG TAGGACTAGT GAAGAGCCTA AGAGTTAATC AAACAGACAT TAAAATATCA CACAGCTCAC GCCGCCTTAG ACCGATTATA TGGCCTGGGG ACACTATTTT TGTGCCTAAA GGTTGGGAAT TCCCAACAAA CGCAAAGAAG CTGCGAATAG CGGTTCCAAA GAAGGATGGT TTCAACAATT TTGTGGAGGT AAAAAAGGAT GCAAATACTA ATGCTCCAAC GATCACCGGG TTTTGCATAG ATGTTTTCGA AACGGCAATG AGACAAATGC CATATGCTGT CCCCTATGAG TACATCCCCT TTGAAACTCC TGATGGAAAA TCGCGTGGAA GTTACGACGA AATGATTTAT CATGTGTTTC TTGGGGAGTT TGATGGAGCT GTAGGGGATA TCACAATCTT AGCTAATCGG TCTTCATACG TCGATTTTGC ATTGCCATAC TCGGAGACGG GTATTGTAGT GGTTGTGCCG GTCAAGGATG AGAGGGAAAA AGGAAAATGG GTTTTCTTAA AGCCTTTAAC ATGGGAGCTA TGGGTCCTCA CTGCTGCTTC TTTTCTCTAC ATTGGAATCA TGGTTTGGAT TTTTGAGTAC CAAGCAAATG AGGAGTTCAG GGGACAGAGC ATTATTAATA AAATATCTAA TGTGTTCTAC TTCTCATTTT CGACTCTCTT TTTCGCACAC ATGAGGCCAT CAGAGAGCAT TTTCACAAGA GTTCTTGTGG TGGTTTGGTG CTTTGTGTTG CTTATTCTTA CTCAGAGCTA CACAGCAACA TTGACATCGA TGCTGACGGT TCAAGAACTT AGACCAACAG TGAGACACAT GGACGATCTG AGGAAGAGCG GAGTTAACAT CGGATACCAA AGTGGTTCGT TTACATTCGA AAGGCTGAAA CAAATGGGTT ACAAAGAATC GAGGTTAAAG ACTTATGATA CTCCTCAGGA AATGCATGAA CTTTTTCTTA AAAAGAGCAG CAATGGTGGT ATTGATGCTG CATTCGATGA AGTCCCTTAT GTCAAGCTTT TCATGGCTAA ATATTGCTCA AAATATTCCA TTATCGAGCC TACCTTTAAG GCTGATGGCT TTGGCTTTGC CTTTCCATTG GGATCTCCTT TGGTGCCAGA TATTTCAAGA CAGATCTTGA ATATAACAGA GGGAGAGACC ATGAAAGCTA TAGAGAATAA GTGGCTCCTT GGAGAAAAAC ATTGTCTAGA CTCAACCACA TCGGATTCTC CAATCCGGCT CGATCACCAC AGCTTTGAAG CTCTATTTAC GATCGTCTTT GTTGTTTCTA TGCTTCTACT CTTAGCCATG TTGGTTTATA GAAGATACCA AGAAATAGAA GGCGGCGAAA CCAACGCTCC ACCTAGTCCG CCAAGAGATG ATAACATGAG AGCTCCAGCA GCTAGTCCGC CAAATGATGA TCAAGTCCAT GAGCCACCTG GTCCTGCATT ACATGAAGCC GATGCACCAG ACGCTCAAGA TCAGCTTCTG AATGATGAAG TTAATGTTGG AGATAGAAAT GAAGTAGACA TTATTGTGGA AGTCGACCCA ACTTTGATTC ACCGTCGAAA TCTGATCACC TCAAAGACTA TACCCATCCG AAGAGCTGTG CCATTATTCT CGAGGATTAA GTCCGCATAG 
Length2880
Protein Sequence
Protein Residue
Map Locationscaffold_6: 4329056.. 4333145
Download Sequence
A.thaliana
AGI-codeAT5G11210.1
Descriptionglutamate receptor 2.5
TAIR curator summarymember of Putative ligand-gated ion channel subunit family
Alias[ATGLR2.5][GLR2.5][ARABIDOPSIS THALIANA GLU][glutamate receptor 2.5]
Gene coexpression
MR
MR Locus Description
10.8167 Ahg926044
11.225 Ahg891036 histone H2A 4
15.3623 Ahg916049
17.4356 Ahg925942
24.6577 Ahg484723 Glutamine amidotransferase type 1 family protein
31.1448 Ahg326329 Defensin-like (DEFL) family protein
31.1448 Virus1927
31.1448 Ahg939353
31.1448 Ahg337274
31.1448 Ahg913514
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression