Detail



ID : Ahg893233

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893233|Al_scaffold_0006_1229
Sequence
ATGGAGCAAA GAAGAAGAAG AAGAAGAAAT GGATGTAGTA GCAACACTAT CTCTCTGCTC TTATTCTTCT TTTTAGTCTT CTTTTCAAGA ACAAGCACAA GTACAAGTTG TCGTCGAAGA ACTGTGAAAC ACTTGTCCAC AACTTCAACA TCATCTACAC CACTCGAATC AAGAATCACT TCCAAGGTTA TTGTTGTCAG CATCGTTTCA GGGATTTTAA CCGGGTTGGT TTCGGCTTTG GTGTTAACTT TCTTGGTTCG TAGCATTGTC AAATTCATGA AACAGACGCC AATTCTCAAA GGTCCTGTGG TGTTTTCTCC TAAGATTACT CCTAAATCTC TTCACGCAGC TCTCGGTAAT GGTATTCAGT TGCTTGGCTC AGACCCTAAT GGTAAATACT ATAAGATGGT ACTTGATAAT GGTCTAGTGG TTGCAGTCAA GAGACTAGGC TCACTTGAAG GAATTGGTTC ACCAGAAAGT AGTAGTAGCA AGTCGGTTAA GAGAAGGTTG CAGAAGGAAC TTGAGCTTCT TGCTGGGTTA AGGCATAGGA ACCTTATGAG TTTACGGGCT TATGTTCGCG AATCCGATGA GTTCTCTCTC GTCTATGATT ATATGCCGAA TGGTAGCCTT GAGGATGTGA TGCATAAGGT TAGAACGAAA GAGGTAGAGC TTAGATGGGA GATTAGGCTT AGAGTTGCAG TTGGAATTGT GAAAGGGCTT CAGTATCTTC ATTTCAGTTG TGAGACACAG ATTCTTCATT ATAACTTGAA ACCTACAAAT GTGATGTTGG ATTCTGAGTT TGAGCCTCGG CTTGCTGATT GTGGATTGGC TAAGATCATG CCTAGCTCAC ACACAGCGGT ATCTTGCTAC TCTGCTCCTG AGTCTTCTCA AAGTAACAGA TACACAGACA AAAGCGACAT ATTCAGCTTC GGGATGATAT TGGGTGTTCT TTTAACCGGA AGAGACCCGA CCCACCCGTT CTGTGAAGAG TCTGCAAGCG GAGGCAGCTT AGGACAGTGG CTGAAACATT TACAACAATC CGGGGAAGCA CGTGAAGCAT TAGATAAGAC TATTCTAGGA GAGGAAGTGG AGGAAGACGA GATGTTAATG GCTTTAAGAA TCACCATTAT CTGCCTTTCT GACTTTCCGG CAGACCGGCC TTCAAGTGAT GAGCTTGTCC ACATGCTTAC ACAACTGCAC AGCTTTTAG 
Length1209
Protein Sequence
Protein Residue
Map Locationscaffold_6: 5156898.. 5158196
Download Sequence
A.thaliana
AGI-codeAT5G13290.2
DescriptionProtein kinase superfamily protein
TAIR curator summaryEncodes a protein with predicted Ser/Thr kinase activity and membrane localization that is involved in the CLV3 signaling pathway that represses WUS expression in the meristem. Loss of function of CRN can suppress the phenotype caused by overexpression of CLV3. SOL2 isolated as a suppressor of root- specific overexpression of CLE19, a clavata3 like gene. sol2 partially suppresses the short root phenotype caused by CLE19 overexpression. Mutant flowers have extra carpels.
Alias[CRN][SOL2][CORYNE][SUPPRESSOR OF LLP1 2]
Gene coexpression
MR
MR Locus Description
26.9815 Ahg471019
26.9815 Ahg496078 scarecrow-like transcription factor 11 (SCL11)
38.4187 Ahg485234 Sterile alpha motif (SAM) domain-containing protein
52.3832 Ahg477157 Protein kinase superfamily protein
55.4977 Ahg907180 NAD(P)-binding Rossmann-fold superfamily protein
57.2713 Ahg942039 basic leucine zipper 9
57.7062 Ahg478277 Lung seven transmembrane receptor family protein
70.3207 Ahg330119 zinc ion binding
71.7774 Ahg481274 NAD(P)-binding Rossmann-fold superfamily protein
72.0625 Ahg934879 Protein kinase family protein with ARM repeat domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression