Detail



ID : Ahg893517

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893517|Al_scaffold_0006_1513
Sequence
ATGTCAGTGC GAGTTCTGAA TCCTAATGCG GAGGTTCTCA ACAAATCGGC GGCGCTTCAT ATGACCATCA ACGCCGCCAA GGGTTTGCAA GATGTGCTAA AGTCGAACCT CGGGCCTAAA GGAACAATCA AGATGCTTGT TGGTGGTTCT GGGGATATTA AGCTTACCAA AGATGGGAAC ACGCTATTGA AGGAAATGCA AATTCAGAAT CCAACCGCCA TTATGATTGC GAGGACAGCC GTTGCACAGG ATGACATAAG TGGTGATGGT ACTACTTCCA CTGTCATCTT CATTGGTGAG CTTATGAAAC AGTCTGAACG CTGCATCGAT GAAGGTATGC ATCCACGTGT CCTAGTTGAT GGTTTCGAGA TTGCTAAGAG AGCTACTCTT CAATTTCTTG ACAACTTCAA GACCCCTGTG GTTATGGGTG ATGAAGTTGA TAAAGAGATC CTAAAAATGG TTGCAAGAAC GACACTAAGA ACAAAATTGT ACGAAGGCTT AGCTGATCAA CTGACTGACA TTGTCGTTAA TTCGGTTCTC TGCATCCGAA AGCCTGAAGA AGCTATTGAT CTGTTTATGG TGGAAATAAT GCACATGCGT CACAAATTCG ATGTTGACAC ACGATTGGTT GAGGGACTTG TTCTGGATCA TGGTTCGAGA CACCCTGACA TGAAACGACG CGCAGAAAAT TGCCACATCC TAACTTGCAA TGTGTCACTG GAGTATGAGA AGAGTGAAAT CAATGCAGGA TTTTTCTACT CTAATGCGGA GCAGAGGGAA GCAATGGTTA CCGCAGAGAG GCGATCTGTT GATGAAAGAG TTAAGAAAAT CATTGAGCTG AAGAAAAAGG TGTGTGGTGA TAATGACAAC TTTGTTGTCA TAAATCAGAA GGGTATTGAC CCACCATCAT TGGATCTTCT TGCTAGAGAA GGGATTATTG GTCTTAGAAG AGCAAAGAGG AGGAATATGG AACGTTTAGT TTTGGCCTGT GGTGGAGAAG CTGTGAATTC TGTTGATGAC TTGACCCCTG AGTCTCTTGG ATGGGCTGGA CTTGTCTATG AGCACGTTCT TGGGGAGGAA AAGTACACCT TTGTGGAACA AGTGAAGAAT CCTAATTCAT GTACCATCCT CATAAAAGGG CCTAATGATC ACACCATTGC TCAAATTAAG GACGCTGTTC GTGATGGTCT AAGATCGGTC AAGAACACCA TAGAAGACGA GTGTGTTGTG TTAGGAGCAG GAGCTTTTGA AGTTGCAGCA AGGCAACACT TAATCAATGA AGTCAAGAAA ACCGTTCAAG GGCGTGCCCA ACTTGGCGTT GAAGCTTTTG CTAATGCTCT TCTCGTGGTG CCTAAGACAC TTGCAGAAAA TGCAGGTCTT GATACCCAAG ATGTGATCAT TTCTCTTACG AGCGAGCATG ACAAAGGGAA CATTGTGGGG CTGGACCTTC AGGACGGTGA ACCAATTGAC CCGCAACTTG CTGGTATTTT TGATAACTAC TCAGTGAAAC GCCAACTTAT CAATTCAGGG CCCGTGATTG CGTCACAATT GCTTTTGGTG GACGAAGTGA TTCGTGCAGG AAGAAATATG AGGAAGCCTA CTGCTTGA 
Length1608
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6267699.. 6271339
Download Sequence
A.thaliana
AGI-codeAT5G16070.1
DescriptionTCP-1/cpn60 chaperonin family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.7473 Ahg473899 exocyst complex component sec3A
15.4272 Ahg483266 Ribosomal protein S5 family protein
22.4499 Ahg476190 Ribosomal protein L18e/L15 superfamily protein
23.3238 Ahg349542 Ribosomal protein L36e family protein
24.98 Ahg940852 nascent polypeptide-associated complex subunit alpha-like protein 3
29.4958 Ahg473757 ribosomal protein 1
32.4037 Ahg330665 60S acidic ribosomal protein family
36.3318 Ahg944608 eukaryotic translation initiation factor 3K
37.081 Ahg937821 Translation protein SH3-like family protein
42.7083 Ahg493170 FRIGIDA interacting protein 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression