Detail



ID : Ahg893562

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893562|Al_scaffold_0006_1558
Sequence
ATGATAATCA TGATGAATTG TTTTCCGTGT TTCACTTCAC AAAAGAGCAG AAACCCTCCC TGTACGACGA ACGATACTAA CGAAAACGTT GAACACGACG AATTCAGACC ACCTGTTGCT GCGACGACGA AACGAATTGA AGAAAGAGAA ACAGAGCAAA CGCCGTTGAA AACATTCAAT TTCCGGGAGT TAGCGACGGC GACCAAGAAT TTCCGACAAG AATGTCTTTT AGGAGAAGGT GGATTCGGTA GGGTTTACAA AGGAACTCTT CAATCTACTG GCCAGTTGGT AGCTGTAAAG CAGCTGGACA AGCATGGACT ACATGGTAAC AAAGAGTTTC AAGCTGAAGT CTTGTCATTG GCCAAACTCG AACACCCGAA TCTTGTTAAG CTTATAGGAT ATTGTGCTGA TGGCGATCAA CGGCTTTTAG TCTTTGAGTA TGTCTCTGGA GGTTCCCTTC AAGACCATCT TTACGAACAA AAGCCAGGCC AGAAGCCGAT GAATTGGATA ACGAGGATGA AGATTGCGTT TGGTGCAGCG CAAGGATTGG ATTACTTGCA CGATAAAGTT AATCCACCGG TGATATACCG AGATTTGAAA GCTTCTAACA TCTTGTTAGA TGCTGAGTTT TACCCTAAGC TTTGTGATTT TGGTATGCAT AATCTAGAGC CAGGAACATG TGATAGCTTG TTTCTTTCTT CTCGGGTTAT GGATACTTAT GGTTATTCCG CGCCTGAGTA CACTCGAGGG GACGATCTCA CTGTCAAGTC AGATGTTTAT AGCTTCGGAG TTGTGTTGCT CGAACTCATC ACCGGTAGAA GAGCTATTGA CACCACTAAG CCTAATGATG AACAAAATCT AGTTGCTTGG GCACAACCGA TATTTAGAGA ACCGAAAAGA TACCCGGATA TGGCAGATCC TCTTATGAGG AAAAACTTCT CAGAGAGAGG GTTAAATCAA GCAGTGGCAA TAACATCAAT GTGTCTACAA GAGGAACCAA CTGCTCGTCC TTTAATAAGT GATGTAATGG TTGCTCTTAG CTTCCTTTCA ATGTCTACAG AAGACGGTAT TCCAACCACA GTTCCAATTT TATCCTTCAG GGACAAAAGC ATGTCGATTG CTTTAAGCAG ACACGGTTCT TGCTCTGTAA CTCCATTTTG TCTTTCTCGG AAAGATGAAG ACAAAAAATC CAGTTCTTCA TCAGACTCAG AGGATGAAGA AGAAGAAAAA GAAGGAAAAG AAGAAAAAGA AGAAGAAGAA TCAATGAGGA GTAAGAAAAA ACAAGAGCAG GAAGAAACCG CTACGGATTC AGATGATGGG TCTGATTCAA ACTCTGTAAA GGGTCAAGAA GAGGAACATT CTCAGTTAGA GAAAGCCAGA GAGTCTTGCA GCTCCTCCTC TGACTCTGGA AGTGGGAGAA GATCCATTGA TGAAACAAAC GCAACTGCAC AGAGCTTGAA GATAAAGTAC AGTTATAGCT CTGAGGAAGA AGATAACGAG AAGCTAAGCA GTAAAAGCAG CTCTACATCA AACGAAGAAA GCACTTTTTC GCGGTATGAT AGCGATAGAG ATCACGATGA TTCGTCAAGA AACACAAGCA TGCGAATCAA TAGTCTTGCT CATGATGATA ATGAGGAAGA CGAGGAGGAG AATCATGAAA CTCGGAGCTA TACAGATCAC GATGATTCGC CAAGAAACAC GAGCATGCGA ATCAATAGTC TTGCTCATGA TGATGATGAG GAAGACGAGG AGGAGAATCA TGAAACTCGG CTTGAACACA TTCATAGCTC GAAATCTGAA GACCAAAGTG TTTATTCAGA TGATGATGCC GGCGAGGCAA GTGGTGAGTC GTCTTTGCAT AGGATCGAAG CAGAGGAAGA AGAACACATT TCTTCTGATC ATGATTAA 
Length1908
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6422942.. 6425109
Download Sequence
A.thaliana
AGI-codeAT5G16500.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias[LIP1][LOST IN POLLEN TUBE GUIDANCE 1]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg331067 Putative membrane lipoprotein
31.6702 Ahg343365 plastocyanin-like domain-containing protein
39.3954 Ahg946936
61.5792 Ahg946772 glycine-rich protein
63.498 Ahg355952
63.498 Ahg359156
66.5132 Ahg486273 TRAF-like family protein
82.4318 Ahg949205 transposable element gene
85.7321 Ahg470795
87.1206 Ahg349127
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression