Detail



ID : Ahg893654

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893654|Al_scaffold_0006_1650
Sequence
ATGAACTCGA TGAATAACTG GTTAGGTTTC TCTCTCTCTC CTCATGATCA AAATCACCAC CGTACCGATG TTGAGTCCTC CACCACCACA ACCGCCGTAG ATGTTGCCGG AGAGTACTGT TTTGATCTGG CCGCTGCCTC CGATGAGTCT TCTGCCGTTC AAACATCTTT TGCTTCTCCT TTTGGTGTCG TCCTCGAAGC TTTCACCAGA GACAACAATA GTCACTCCCG AGATTGGGAC ATCAATAGTG GTGCATGCAG TAACATCCAC AATAATGAAC AAAATGGACC AAAGCTGGAG AATTTTCTCG GCCGCAATAC CACGATCTAC AATACCAACA AGAACGTTGG AGATGGAAGT GGCAGCTGTG AAGGACCTGG AGGTAGAGAC GGTGGTGGTG GCTCACTAGG CCTTTCGATG ATAAAAACAT GGCTGAGTAA CCATCCGGTG GCTAATGTTA ATTATCAAGA CAATGGTAAC GGTGCACGAG GCTTGTCACT CTCTATGAAT TCATCTACTA CCTGTGATAG CAACAACTAC AACAACAATA ATGATGTTGC CCAAGAGAAT ACTATTGTTG ATGTCGTAGA AGCGACACCA AAGAAAACTA TTGAGAGTTT TGGACAAAGA ACGTCTATAT ACCGCGGTGT TACAAGGCAT CGGTGGACAG GAAGATACGA GGCACATTTA TGGGATAATA GTTGCAAAAG AGAAGGCCAG ACTCGCAAAG GAAGACAAGT TTATTTGGGA GGTTATGATA AAGAAGAAAA AGCAGCTAGG GCTTACGATT TAGCCGCACT AAAGTATTGG GGAACCACTA CTACTACTAA CTTCCCCATG AGTGAATATG AGAAAGAGGT AGAAGAGATG AAGCACATGA CGAGGCAAGA GTATGTTGCC TCTCTCCGCA GGAAAAGTAG TGGTTTCTCT CGTGGTGCAT CGATTTATCG AGGAGTAACA AGGCATCACC AACATGGAAG GTGGCAAGCT AGGATCGGAA GAGTCGCCGG TAACAAAGAC CTCTACTTGG GAACTTTCGG TACACAAGAA GAGGCTGCAG AAGCTTATGA CATTGCAGCC ATTAAATTCA GAGGATTAAG TGCAGTGACT AACTTTGATA TGAGCAGATA CAATGTTAAA GCAATCCTCG AGAGCCCGAG TCTACCTATT GGTAGTTCTG CAAAACGTCT CAAGGACGTT AACAATCCGG TTCCAAGTAT GATGATTAGT AATAACGTTT CAGAGAGTGG AAATAATGCT AGTGGTTGGC AAAACGCTGC GTTTCAGCAT AACCAGGGAG TGGATTTGAA CTTATTGCAG CAACAGCAGG AGAGGTACGT TGGTTATTAC AATGGAAGAA ACTTGTCTAC CGAGAGTAGT AGGGTTTGTT TCAAACAAGA GGAGGAACAA CAACACTTCT TGAGCAACTC GCCGAGCCTC ATGACTAATG TCGATCATCA TATCTCGACT TCTGATGATT CGGTTACCGT TTGTGGAAAT GTCGTTAGTT ATGGTGGTTA TCAAGGATTT GCAATCCCTG TTGGAACATC GGTTAATTGT GATGTCTTCA CTGCTGCTGA GATTGCTTAC AACGCAAGAA ATCGTTATTA TTATGCTCAG CAGCAGCAAC AACAGCAGAT TCAGCATTCT CCGGGAGGAG ATTTTCCGGT GGCGATTTCG AATAACGTTA GCTCTAACAT GTACTTTCAT GGTGAAGGCG GTGGAGAAGG GGCTTCAACG TTTACAGTTT GGAACGACGC TTAG 
Length1764
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6868566.. 6871719
Download Sequence
A.thaliana
AGI-codeAT5G17430.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryEncodes an AP2-domain containing protein similar to ANT. Expressed in embryos and lateral root primordium.
Alias[BBM][BABY BOOM]
Gene coexpression
MR
MR Locus Description
12.9615 Ahg336380 Subtilisin-like serine endopeptidase family protein
15.0997 Ahg905664
23.0217 Ahg489543 C2H2 and C2HC zinc fingers superfamily protein
24.2693 Ahg338146 KNOX/ELK homeobox transcription factor
24.9199 Ahg887595
25.1992 Ahg322757 cytochrome P450, family 71, subfamily B, polypeptide 16
29.8831 Ahg337391
31.5278 Ahg493352 HXXXD-type acyl-transferase family protein
36.2905 Ahg947825
41.5812 Ahg905462
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression