Detail


ID : Ahg893806

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|893806|Al_scaffold_0006_1802
Sequence
ATGATGTTGA CGAGCCCAAC TTTGAAGAGT TTATGGTTCT TGTTCACCAC AGTAGTCACT ATTCTTGGAA TCTTAGGACA AAACCTCCCT TGTGTTTTGT CTACTCCACA CCGTATTCTA GTGGATACAG ATGTCGACAC AGACGATTTA TTCGCTATAC TCTACCTCCT GAAACTCAAC AAATCAGAAT TCGATCTAGT CGGGATTACA TTGAGTGCGA ATGCATGGAC AAACGCAGGA CACGCCGTGA ATCAAGTGTA TGATTTATTG CACATGATGG GTCGTGACGA TATCCCCGTT GGTGTCGGCG GCGAAGGTGG GATTCGCGAC GACGGTACTA TTCACTCTGA CGTCGGTGGT TATTTTCCGA TCATCGAACA GGGGATGACG ACAACAGGAG AATGTAGATA CAGACAAGCC ATTCCTAAAG GTCTTGGAGG CCTTCTCGAC ATAGACTCCA ATTATGGATT TCGTAAACAG TTTCTTCCTC AGGGGAACAG AAGATACACT CCTCTCCGGC AACCAACGGC ACAAAAAGTG ATCGCCGACA AAATTTCCGA AGGTCCAACC ACTGTGATCC TGATCGGATC CCACACCAAT TTCGCACTTT TCTTGATGTC AAACCCTCAC TTGAAACACA ACATCCAACA CATCTACATC ATGGGCGGTG GTGTCCGGTC ACAAAACCCC ACCGGCTGCT GTCCGGCGAA CTCCACTGCT GCGGAATGTC AACCTCGACA GTGTGGGAAC CGTGGAAACT TGTTCACAGA TTATACAAGT AATCCTTACG CTGAATTCAA CATCTTCGCT GATCCTTTCG CTTCTTACCA GGTGTTTCAT TCAGGTGTTC CAGTGACTCT GGTTCCTCTA GATGCAACCA ACACTATTCC GATCAACCAG AAGTTCTTCG AGACATTCGA GAAGAACCAG AGAACATACG AAGCTCAATA CGTTTTCTTA TCTCTGAAAA TCGCCAGAGA CACTTGGTTC GACGATGAAT TCTATAAGAG CTACTTCATG TGGGATTCTT TCACGGCTGG TGTTGCAGTC TCAATTATGA GAAACTCTGG TAACAACAAA AATGGTGAGA ACGATTTCGC GGAGATGGAG TATATGAACA TAACCGTTGT TACTTCAAAC AAACCTTATG GAAGATCCGA CGGCTCAAAT CCATTCTTTG ATAATAGAAG AACTCCAAAG TTTAACCTAA CCGTTGGAGG AGTTCATAGT GGTCATGTTC AGATGGGTTT GCGAGATCCA GCTTGCTTAC CAAAAAGCGG AAAAGGAAGA GGAAAGTGTA AGGATGGTTA CACACAAGAG ATCTCTGGAC CTGATTCTGT TCGTGTTCTT GTCGCGACAC GAGCTAAACC CAACATAAAC ATCAAAAGTA AACTTGACAG AGAGTTCTAT GTTGATTTCC TGGAAGTTTT GAATAGACCT GAAGAAACGG GGAGATTTAA CTTTTCATCT CAGTTTCCAT ACTACAAAGA AGAACTGTTT AGACCAGATC TTAGCAAAAC ACGTCTCGGA AAGCCTGTTG TTTTCGATAT GGACATGAGC GCCGGAGATT TCCTTTCTCT CTTCTACCTC CTCAAAGTTC CAGTGGAAGA AATCGATTTG AAGGCTATTA TTGTGAGCCC AACTGGTTGG GCTAATGCAG CAACAATCGA CGTGGTCTAT GATCTGCTTC ATATGATGGG TCGGGACGAC ATTCCAGTCG GTCTGGGAGA CATGTTGGCA TTGAACCAAT CCGACCCGAT TTTCCCACCG GTTGGAGGTT GCAAATACGT CAAGGCTGTT CCACGAGGCT GTGGCGGATT TCTGGATTCC GACACTCTCT ACGGTCTTGC TCGTGACCTT CCGAGAAGCC CACGCAGATA CACTGCAGAG AATTCAGTAG CAGATGGAGC TCCGAGGGAC ACTGATCGGC CTGAACTCCG ACAACCTCTG GCTCTTGAAG TTTGGCAAAA TCTAACCAAA TCTGGTAACG GAGTGTCTAA TATCACTGTA CTAACCAGTG GACCGTTGAC TAGCTTAGCC AAGATTATCT CATCAGATAA AAAATCATCC TCAATAATCA AGGAAGTTTA CATCGTGGGT GGACATATAA ACCCTGAGAA ATCAGACAAA GGGAATATAT TCACGGTTCC TTCGAATGCA TATGCTGAAT TCAATATGTT TCTTGATCCT TTAGCAGCTA AGACCGTTCT TGAATCCGGT CTAAACATCA CACTCATCCC TCTAGCAACC CAACGCAAGT TTTCTTTCCA ACCAATGCTT AATAGACTCA ATCCCTCAGC GAAAACACCC GAAGCTCGGT TTGTGAGACG GCTGCTTGCA AGATTGCAAG CTCTTCATCA GAAACACAGG AGATACACGC ACATGGACAT GTTCTTAGGG GAAATTATTG GAGCAGTTTT CTTGGGAGGC GATCACGCTT CATTGAAGCC GAAACTGAGA GCTGAGCACT TAAAAGTGAT CGCTGAAGGG GACGAATCGA TAGATGGTAA GATATTGATT GATAAACTGC GCGGCAAACA AATAAAGATA CTCGAAATAG TAGATCTGAG AAGCTTCTCT GAGAGTTTTA CTTCTAGACT CGATGATAAG AAACAATCAG CAGTCATAGG AAGCTTTGAA GAACAAAAGA AAAAATGGAG CACACCACCA AGCTGA
Length2676
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7523759.. 7528862
Download Sequence
A.thaliana
AGI-codeAT5G18860.1
Descriptioninosine-uridine preferring nucleoside hydrolase family protein
TAIR curator summary
Alias[NSH3][nucleoside hydrolase 3]
Gene coexpression
MR
MR Locus Description
11.8743 Ahg484289 18S pre-ribosomal assembly protein gar2-related
35.9444 Ahg346167 receptor serine/threonine kinase, putative
41.1096 Ahg926155 Protein kinase superfamily protein
43.3359 Ahg483328 RING/U-box superfamily protein
52.5738 Ahg475116 WRKY family transcription factor
57.3149 Ahg484123 glutamate decarboxylase 4
66.9701 Ahg949481 Predicted AT-hook DNA-binding family protein
67.1193 Ahg908250 Mannose-6-phosphate isomerase, type I
68.1762 Ahg329411 WRKY DNA-binding protein 31
70.1498 Ahg474972 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression