Detail



ID : Ahg894293

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894293|Al_scaffold_0006_2289
Sequence
ATGATTAATT TACTAGATTT TGAATGGACT TGTATGCACA TTATTACTAG GTGTGGATTT CTCAAGTGTA GCAGTGACTA TCTTACAAGA AAACACCTGC GGAGGAATAG GACTCAAGCC ATAGCAGAGT ATTTAGGTTC AGCTTCAGAT CCTAAGAAGC CAACTGGGAA GTCAAGTTAT CATCCTTCCG AAGAAATCAG AGCTTATGTG CCAGAGAAGA ATCCTGGAGA TTCTAGGCTT TCACCTCCAG AAACTGCTAG AACCATCATT GAGGTGAACA AAAAAGGAAC CCTGATGCTT TCAGGTTTAC TTGGTATTGG AGTTCATGAG AATATTCTCT GGCCCGATAT ACCTTATGTA ACAGATCAGC ATGGAAATAT ATATTTTCAA GTAAAGGAAA ATGAGGATAT AATGCAGACT GTTGTTGCTT CTGATAATAA TTATGTGCAA GTGATAGTAG GTTTTGATAC GATGGAGATG ATCAAGGACA TGGAGCTGAG CAGTCCATCT GGTATTGGTT TCGGGATTGA AGAAATCGAA GATGGTGAAA GTGAAGTCGA GGATGAAAAC AAGGGGGATG AGGATGAAGG AGAAGACAAA GATGACGAGG AATGGGTTGC TGTTCTAGAA GATGGAGATG ACGAGGATAG TTATGTATCA GAGTCTGATG AATCACTTGG AGACTGGGCA AACTTGGAAA CGATGCGGTA TTGCCATCCT ATGTATTTTG CCAGGAGGAT GGCCGAGGTT GCTTCAACTG ATCCTGTAAA TTGGATGGAG CAGCCGTCCG CTGGCCTTGC TATCCAGGGG CTCTTGAGTC GTGTTGTTGT GGAAGATCAC TCGGATATCC AAAAACATAT CTCTGGTTGC AAATCTACAG GCACTGACAG AAACAAGGAG GGAGGAAACT CAGAAGAGAA ATTTGAAGGC ATTGGTGAGA ATGAATCTGA GATATTGCAG CTTGAAAATT CGAGAAATGC CATATCGTAC TACAAGCTGG AGATAATAAG AATCCAGCTC ATCACGGCAC AGGGACATCA GGCAAGATTC TCACGCCTTA CTGAAGTGAA AGTGGAAGAC GTCAGGAAAG TACAACCTGA TGCTATTGCT CGTGCATCAG ATGGTATCGT GACTCGTCTA GAAGAAGATG GCGATAAACT AACTGAAGCT CTCAAATCTC TGTGCTGGAG ACATAATGGG ATTCAAGCAG AGGAAGTGAA GCTCATAGGG ATAGATTCAC TTGGTTTCGA CCTCAGGATT TGCTCAGGAA TGCAAATTGA GACATTACGG TTTGCATTCT CGATAAGGGC AACATCAGTT CACAACGCTG AGGGACAGTT GAGAGAATTA TTATTCGTTT CGACACCACC CAAACCACTA GAAACCAAAA CAAACTAG 
Length1398
Protein Sequence
Protein Residue
Map Locationscaffold_6: 9821375.. 9823989
Download Sequence
A.thaliana
AGI-codeAT5G24060.2
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
21.166 Ahg936324 cytochrome P450, family 71, subfamily B, polypeptide 4
22.5167 Ahg948495 Disease resistance protein (TIR-NBS-LRR class) family
29.9165 Ahg479869 alpha/beta-Hydrolases superfamily protein
34.2053 Ahg948136 nuclear factor Y, subunit B2
36.3318 Ahg491120 glutamate receptor 2
38.0657 Ahg488341
40.2865 Ahg490753 FK506-binding protein 16-2
48.4974 Ahg489859 Sucrose-phosphate synthase family protein
60.2495 Ahg474728
66.873 Ahg480386 lipid transfer protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression