Detail



ID : Ahg894497

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894497|Al_scaffold_0006_2493
Sequence
ATGCAGGCAT CAAGAGCGAG ACTCTTTAAA GAATACAAAG AGGTTCAGCG AGAGAAAGTA GCTGATCCAG ATATTCAATT GGTGTGTGAT GATACCAACA TATTCAAATG GACCGCTCTT ATCAAGGGAC CGTCGGAGAC TCCTTATGAA GGCGGTGTTT TTCAGCTTGC TTTTGCTGTT CCTGAACCAT ATCCTTTGCA ACCTCCTCAA GTGCGATTCT TGACCAAAAT ATTTCATCCA AATGTGCATT TCAAGACAGG GGAAATTTGC CTCGACATAT TGAAGAATGC GTGGAGTCCC GCTTGGACGC TTCAGTCCGT GTGTAGAGCT ATCATAGCAT TGATGGCTCA TCCTGAGCCG GACAGTCCTC TTAACTGCGA CTCAGGGAAT CTTCTAAGAT CTGGGGATGT GAGAGGGTTC AATTCAATGG CACGCATGTA CACGCGCCTC GCCGCAATGC CAAAGAAAGG ATGA 
Length474
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10915326.. 10916085
Download Sequence
A.thaliana
AGI-codeAT5G25760.1
Descriptionperoxin4
TAIR curator summarymutant displays sucrose-dependent seedling development and reduced lateral root production. PEX4 interacts with PEX22 in a yeast two-hybrid. Necessary for peroxisome biogenesis. The PEX4 and PEX22 pair may be important during the remodeling of peroxisome matrix contents as glyoxysomes transition to leaf peroxisomes.
Alias[PEX4][UBC21][peroxin4][ubiquitin-conjugating enzyme 21]
Gene coexpression
MR
MR Locus Description
46.076 Ahg473401 alpha/beta-Hydrolases superfamily protein
60.4318 Ahg322589 Leucine-rich repeat protein kinase family protein
76.5637 Ahg898422 Ras-related small GTP-binding family protein
81.4371 Ahg488831 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain
92.1575 Ahg311964 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression