Detail



ID : Ahg894792

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|894792|Al_scaffold_0006_2788
Sequence
ATGAGAAGAG AAGTTGTTGA GTCGGTGAGC ACCAATGCTT CTAATGAAAG GGTTCACGTG GCTCCCAAGA TAGCTGCAGA GGAAGAAGAT TATGAGGTGA AAGAATGCAC TGAGGAGAAT TCTCTCTCTC TGAATCATAA ATCTTCTAAT GTAATCAGAG AGAATGATTT GAAGAAGAAG CATTTGGATG AAGAAGATGA TTGTTCTGTC GCTTCTTCGG TGAAGAATGC TAAGTCTAAA GTAACTCATG GAACCGCTCC CCGATTTAGG AGTGCTCAGC GAGCTGAGAA ACGCAAAGAG TATTATCAAA AGCTTGAAGA GAAACACCAA GCACTTGAAG CCGAAAGGAT CGAGCTTGAA CAAAGGCAAA AGGCAAGAAT CTTTTTAGAA GAACAAGAAG CAGCCATTAA ACAGCTTCGG AAAAACCTTA AGTTTAAGGC TAATCCCGTT CCCGACTTCT ATTACCAAGG ACCTCCCGTG AAACCAGAGC TTAAGAAGTT TCCTTTGACG CGTCCAAAGT CGCCGAAACT CAATCTGTCC CGGAGAAAGA GCTGTAGCGA TGCGATTACC TCGTCTGGTG AAGAGAATTC GAAGTCACAG AACCGCCACA GCGTGGTAGA ATAG 
Length624
Protein Sequence
Protein Residue
Map Locationscaffold_6: 13057488.. 13058448
Download Sequence
A.thaliana
AGI-codeAT5G28646.1
DescriptionTPX2 (targeting protein for Xklp2) protein family
TAIR curator summaryEncodes a novel protein. The wvd2 gain-of-function mutant has impaired cell expansion and root waving, and changed root skewing.
Alias[WVD2][WAVE-DAMPENED 2]
Gene coexpression
MR
MR Locus Description
16.6132 Ahg491924
20.8806 Ahg491133 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
22.6274 Ahg473139
32.5576 Ahg941288 Glycosyl hydrolase superfamily protein
32.6037 Ahg918583 Auxin efflux carrier family protein
36.6742 Ahg489077
46.9255 Ahg915766 NAD(P)-binding Rossmann-fold superfamily protein
47.2546 Ahg485744 C2H2-type zinc finger family protein
51.8459 Ahg919259
56.3116 Ahg929930
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression