Detail



ID : Ahg895168

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|895168|Al_scaffold_0006_3164
Sequence
ATGGGTTCGT CGTCGAACGG AGGAGTGCCA CCTGGTTTTC GGTTTCATCC GACGGACGAA GAGCTTCTCC ATTACTACTT GAAGAAGAAA ATCTCTTACC AAAAGTTTGA GATGGAAGTC ATCAGAGAGG TTGACTTAAA CAAGCTTGAG CCTTGGGATT TGCAAGAGAG ATGCAAGATA GGGTCAACAC CGCAGAACGA ATGGTATTTC TTCAGCCACA AGGACAGGAA ATATCCGACA GGGTCAAGGA CCAACCGTGC TACTCATGCA GGGTTCTGGA AGGCGACGGG ACGTGACAAG TGCATAAGGA ACTCTTACAA GAAGATAGGA ATGAGGAAGA CACTTGTGTT CTACAAAGGT AGAGCTCCTC ATGGCCAAAA GACTGATTGG ATCATGCATG AGTACCGTCT TGAAGACCCT GATGATCCTC AAGCCAACCC TAGTGAAGAT GGATGGGTGG TATGTAGAGT GTTCATGAAG AAAAATTTGT TCAAGGTAGT AAATGAAGGT GGCACAAGCA TTAACTCATC GGACCAACAC AACCATGATG CATCCAACAA CAACCACACA CTTCAAGCTC GTAGCTTTAT GCACCGAGAC AGTCCATACC AGCTTGTACG TAACCACGGA GCCACGACAT TTGAACTCAA CAAGCCTGAC CTTACTCTTC ATCAATACCC ACCAATCTTC CACAAGCCAC CTTCACTTGG ATTTGACTAC TCCTCAGGAC TTGCAAGGGA CTGTGAGAGT GCGGCGAGTG AAGGGTTACA ATACCAGCAA GCGTGTGAGC CGGGTTTAGA GGTCGGTACT TGTGGGACAG TGGCTAGTCA TGATAGTCAT CAACAAGGTT TAGGTGAATG GGCAATGATG GATAGACTTG TGACTTGTCA CATGGGAAAT GAAGATTCCT CTAGAGGGAT TAGGTTTGAG GATGGTAACA ACAATTCTTC GTCTGTTGTC CAGCCAGTTC CTGCGACGAA CCAGCTTACG TTGCGCAGTG AGATGGATTT CTGGGGTTAT TCTAAATAG 
Length1029
Protein Sequence
Protein Residue
Map Locationscaffold_6: 19161420.. 19163019
Download Sequence
A.thaliana
AGI-codeAT4G10350.1
DescriptionNAC domain containing protein 70
TAIR curator summaryNAC domain protein. SMB, BRN1, and BRN2 act to regulate root cap maturation, in a partially redundant fashion.BRN1 and BRN2, control the cell wall maturation processes that are required to detach root cap layers from the root.
Alias[ANAC070][BRN2][NAC070][NAC domain containing protein 70][BEARSKIN 2]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg947825
9.21954 Ahg901222 homeobox-3
12 Ahg352619
12.1655 Ahg330263 cation/H+ exchanger 24
12.2474 Ahg900378
13.6748 Ahg481759 RmlC-like cupins superfamily protein
13.9642 Ahg343365 plastocyanin-like domain-containing protein
14.1421 Ahg931779 glycine-rich protein 2B
19.8997 Ahg323331 F-box and associated interaction domains-containing protein
20.347 Ahg331183
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression