Detail



ID : Ahg895371

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|895371|Al_scaffold_0006_3367
Sequence
ATGGTGAACC CGATTTTAAT GGCTTGTGTA ATCGCCGGAA TTGTCGTCGG AGTATTTAAC GAAGTCGACG GAATTCAGAT TTTATCGAAA TCAAAGCTGG AGAAGTGTGA GAAAACATCA GATTCTGGTA ATCTCAATTG TTCTACTAAG ATCGTCTTGA ATCTCGCTGT TCCCAGTGGA TCCAGTGGAG GAGAGGCTTC GATCGTAGCG GAGATCGTCG AGGTTGAAGA TAATTCGAGT AGTAATATGC AAACCGTACG GATTCCACCG GTTATTACAG TGAACAAATC CGCAGCATAT GCTCTTTATG ATCTTACTTA CATTAGGGAT GTGCCTTATA AACCTCAAGA GTATCATGTT ACGACTCGAA AGTGTGAACC CGATGCTGGA CCGGATATTG TACAAATATG TGAGAGGTTG AGAGATGAGA AAGGGAATGT TTTGGAGCAG ACTCAGCCGA TTTGTTGTCC ATGTGGACCG CAGAGAAGAA TGCCTTCATC TTGTGGAGAT ATTTTTGATA AGATGATAAA AGGCAAGGCA AATACTGCGC ATTGCCTTCG TTTTCCAGGT GACTGGTTCC ATGTTTTCAG CATTGGACAA CGGTCACTAG GATTTAGCGT GCGAGTTGAG TTGAAAACAG GAACTAGAGT TTCAGAAGTG ATCATTGGTC CTGAAAATAG GACAGCTACT GCAAATGATA ATTTTCTCAA GGTTAATCTC ATAGGAGACT TTGGTGGTTA TACAAGTATT CCTTCTTTCG AGGACTTCTA TCTTGTAATC CCAAGAGAGG CGGCTGCAGC GGGACAACCA GGGAGCTTAG GCGCAAATTA CTCAATGTGG ATGCTGCTTG AGAGAGTGAG ATTTACATTG GATGGCTTAG AATGTAATAA AATCGGTGTT GGTTATGAAG CTTTCAACAC CCAACCAAAT TTCTGCTCTT CACCATATTG GAGTTGCTTG CATAATCAAC TATGGAACTT CCGCGAGGCA GATATTAACC GAATCAGCCG ACACCAACTT CCTTTATATG GACTGGAAGG AAGATTTGAG AGGATTAATC AACATCCAAA CGCAGGGCCT CACTCGTTCT CGATTGGAGT CACGGAAACA CTCAACACAA ATCTAATGAT AGAACTAAGA GCTGATGATA TTGAATACGT TTTCCAGAGG AGCCCTGGTA AAATCATAAA CATCGCTATA CCCACATTTG AGGCACTTAC ACAATTCGGA GTTGCTGCAG TCACAATCAA GAATACCGGT GAAGTAGAAG CATCTTATAG CTTAACGTTT GATTGCTCCA AAGGCGTGGC TTTTGTTGAG GAGCAATTCT TCATTATAAA ACCAAAAGCG GTTACTACTC GAGCTTTTAA GCTATACCCG ACGAAAGATC AAGCTGCAAA GTATATATGC ACAGCTATAC TCAAGGATTC TCAGTTCAGT GAAGTAGACA GAGCCGAGTG TCAATTTAGT ACAACGGCTA CCGTACTCGA CAATGGAACT CAGGTTACTA ATCCATTTCA AATTCCAGAA ACTCATCCTA AAGGTTTCTT TGATTCGATA AGGATACTAG GGACGAAAAT CATCAATGGT TTAGTCGATT TCATCACCGG AGATACTTGC AGAAACAAAT GCTCGAGTTT CTTTGATTTC AGCTGCCACA TTCAATACGT TTGTTTAAGC TGGATGGTTA TGTTCGGCCT TCTCCTCGCT CTTTTCCCAA CCACATGTTT GCTTCTTTGG CTCTTACACC AAAAGGGACT ATTTGATCCA TGCTACAACT GGTGGGAAGA TCATTTCGAC TTAGACCATC ATAGGAGATT ATTACCCACC AGAGAAAACA TCGCTAACCG CCATCATCAC CATCACAAGC ATCATCATGG TGTCAAAACC CATAATCATC ATCGTAGGAC ACACCAGAGA CACAAACACC ATCATGGGGA AAACCATGAC GTTTTGCAGA AGATGATGCT TGACCGTGAC CACAGCGACG CTCACTACTA CCACCAACTT CATCGAGTCC ATAAAGATAG CAAGCAGAAG CAGCGTAGGC GAGCCAAGCA CGGGATTGTC TTGCCACGTG ATGTGCACGT GGAAAGACGG AGGAGACAAA GACTACGTGA GTGTTAA 
Length2127
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20260400.. 20263905
Download Sequence
A.thaliana
AGI-codeAT4G11720.1
Descriptionhapless 2
TAIR curator summaryEncodes HAP2 with the following predicted motifs: an N-terminal secretion signal, a single transmembrane domain and a C-terminal histidine-rich domain. HAP2 is expressed only in the haploid sperm and is required for pollen tube guidance and fertilization. Predominantly localized to sperm endoplasmic reticulum membranes. May also reside in other endomembranes, including the plasma membrane.
Alias[GCS1][HAP2][GENERATIVE CELL-SPECIFIC 1][HAPLESS 2]
Gene coexpression
MR
MR Locus Description
3.4641 Ahg931525
26.1151 Ahg489384 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
26.8701 Ahg900245
31.4325 Ahg925165
31.4325 Ahg921280
31.4325 Ahg932292
31.4325 Ahg938752
31.4325 Ahg931781
31.4325 Ahg924501
31.4325 Ahg931859
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression