Detail



ID : Ahg896223

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896223|Al_scaffold_0005_189
Sequence
ATGGGTTCAG AGAGTGATGT GAATGAAATC AACCAAGTCG TTGAACCAGT TGATTGCATT GGTTCGGCTT TCAATTGTAA GAACAAGATG ATGTGTCCAA GCTGTAGGAA AGTCGAAAAA GGTGAATGGA AGTATGCAGC ACATCCAGAC CATCCAACTT TCAATCTGGA ACATGTGCTT AATGATCACT TACCTATCAG CTGGGAGAAT GGGCCAATCC TGGCCTTACC AGCTTCATCA GCGTGGAGAG GCAGACATAT TACAAGTGTC AAGTTACTTA GTGATATTGG TTTTAAGACC AAAGTTTGCC TCGATGATGC TCTGGAAATC CTGGAAGCTT GGGTACATTG TGGAGACTCT TTCAAATCAA GCATATCTCA GATTACCAGA TTTTACAAAT ATTTGTGGAA TGAAATGGCT GATTCAAAGC AGAAAATTAC TGAAAAGCTC CGTACTCTAC CATCTGTATT TGTACCACAC AAAATTGGAA GTAGGCAGAA TGATCTGATA ACTGGAATAT TCTTGTCACT TGATGATGTA TACTGGAATG ATTCCGCTGG CGTTTTAGAC GAGATAAAAG AGATCAGTTC GAAGATCAGC AGTGTTGTGG AATCATTGCA TAGGAAAACA TTGTGCAATA TTTATCCAGG TCTCCGTGAC TTTTTTGTGA ATGGGTGTGG AGTACCTGAG ACGCCTTCTT TTCAAGAGTA CCTTAAAATT CTAGGACAGT TTGCACATTA TGTGTCACCT TCATGTGCTG CCAAGGCTGT CTTCAAAATT TTCCTGAAGT GGAGTGATGA CTTGAACTCT GGCAAATCTT CGGAAGATGT TGTTCATTTT AAAGAGAGAC TTTCAGAACT TGAGTACACT GTGCTTCCTA CTGAAAATGA TAAGTGGGTT TCCTTACACG ATGATGAGAA GTTAAAAAAG AGATTTAAAA AGAAGGATAA TAGAAGAGAT ACGATGAAGA GATTTAAAAA GAAGAGATAC GCCTTTCTAA AATTGCATTC TCAAAAACAA GAAAACACTA GAACTATGCA CAATTTCCAT ACACTCAAAG CCAATTCAAA GAAAACTCAA CAAATCAGAA TACATTGCAT TACTAAAAAG CACATTAACA TTGATGATCC CTTACCTATT CCCCTAAAGA ACAACATCCA ACATATTCGT CTCATTTTCT AA 
Length1182
Protein Sequence
Protein Residue
Map Locationscaffold_5: 1067037.. 1070621
Download Sequence
A.thaliana
AGI-codeAT4G13750.1
DescriptionHistidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
TAIR curator summaryEncodes NO VEIN (NOV), a plant-specific nuclear factor required for leaf vascular development, cellular patterning and stem cell maintenance in the root meristem, as well as for cotyledon outgrowth and separation. nov mutations affect many aspects of auxin-dependent development without directly affecting auxin perception.
Alias[EMB2597][NOV][EMBRYO DEFECTIVE 2597][NO VEIN]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg942237 Eukaryotic aspartyl protease family protein
2.44949 Virus1134
5 Ahg927328 arginine/serine-rich protein-related
6.48074 Virus3223
6.9282 Ahg930030
7.93725 Virus3478
9.8995 Ahg933542 Homeodomain-like superfamily protein
10.9545 Ahg496341 RmlC-like cupins superfamily protein
12.6491 Ahg947962
12.9615 Ahg321223 Protein of unknown function (DUF1640)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression