Detail



ID : Ahg896231

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896231|Al_scaffold_0005_197
Sequence
ATGGAAGATA TCATCGGCGT CGTGGCTCTC GCCGCGGTTC TCCTCTTCTT CATGTACCAA AAACCGAAAA CCAAACGGTT CAAGCTGCCT CCGGGACCAT CTCCGCTTCC GCTTAACCCA CAACGGTTCT TTGCTGGATG GGCCAAGAAA TACGGACCAA TCTTGTCATA CAAGATAGGA ACCAGAACAA TGGTGGTGAT ATCTTCAGCT GAGTTAGCTA AAGAGCTTCT CAAGATGCAA GATGTCAACT TTGCCGACCG GCCTCCACAC CGTGGCCACG AGTTCATATC CTACTGCCGG CGTGATCACA TGGCATTGAA CCACTACACA CCTTATTACC GAGAGATAAG GAAGATGGGG ATGAACCACT TGTTCTCACC CACAGCTAGG AGAATGATGA ATAAGATCAA CAAGGCCGCC GATAAATCCG AAGTGGTCGA TATAAGCGAG CTTATGTTGA CGTTCACGAA CTCTGTTGTG TGTAGACAAG CGTTCGGGAA GAAGTACAAT GAAGATGGGG AAGAGATGAA GAGGTTCATC AAGATTATTT ATGGGACTCA AAGCGTTTTG GGGAATATTT TTTTCTCTGA TTTTTTCCCA TATTCTAGTT TTCTCGATGA TTTGTCAGGC CTCACAGTTT ATATGAAAGA GTGTTTTGAA AGACAAGACA CTTATATTCA AGAGATTGTC AATGAGACTC TTGATCCCAA GAGGTTCAAG CCCGAAACCG AGAGCATGAT CGATCTCTTG ATGGAGATCT ACAAAGAACA ACCTTTCGCT TCTGAGTTCA CTGTAGATAA TGATATCGTA GTGGCGGGTA CGGATACAGC AGCTGCGGCG GTTGTGTGGG GAATGACGTA TCTAATGAAG TACCCTCAAG TGATGAAGAA TGCTCAAGCA GAAGTGAGAG ACTATATGAA AGAACAAGGG TTAACATTCG TTACTGAAGA AGACGTCAAG AACCTTCCTT ACTTCAGAGC CTTAGTTAAA GAAACCCTAA GGATCGAGCC GGTCATACCT CTCCTTATCC CTCGTGCGTG CATTCAAGAT ACCAAGATCG CCGGTTACGA CATCCCGGCC GGGACAACGG TCAACGTCAA CGCCTGGGCC GTGTCACGTG ACGAGAAGGA GTGGGGACCG AACCCTGACG AGTTCAGGCC CGAGAGGTTT CTTGAGAAGG AGGTTGACTT CAAAGGCACA GACTATGAGT TTATACCATT CGGGTCAGGC CGGAGA 
Length1236
Protein Sequence
Protein Residue
Map Locationscaffold_5: 1144939.. 1158676
Download Sequence
A.thaliana
AGI-codeAT4G13770.1
Descriptioncytochrome P450, family 83, subfamily A, polypeptide 1
TAIR curator summaryEncodes a cytochrome p450 enzyme that catalyzes the initial conversion of aldoximes to thiohydroximates in the synthesis of glucosinolates not derived from tryptophan. Also has a role in auxin homeostasis.
Alias[CYP83A1][REF2]["cytochrome P450, family 83, subfamily A, polypeptide 1"][REDUCED EPIDERMAL FLUORESCENCE 2]
Gene coexpression
MR
MR Locus Description
1.41421 Virus2978
2 Ahg951390
3.87298 Ahg946899
4.24264 Virus1467
4.47214 Ahg952370 Plant invertase/pectin methylesterase inhibitor superfamily
4.58258 Ahg952538 Nucleotide/sugar transporter family protein
4.89898 Ahg497428 F-box/FBD-like domains containing protein
5.19615 Ahg322596 cytochrome P450, family 83, subfamily A, polypeptide 1
5.47723 Ahg358673
8.24621 Ahg887377 Glutamine amidotransferase type 1 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression