Detail



ID : Ahg896301

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896301|Al_scaffold_0005_267
Sequence
ATGGCACCCG CAAGCGCTTC TTCTGTAGTC GTGACCAAGC CACTGACCAA AGAAGATCTG ATTGCCTATT TTGCTTCTGG ATGCAAACCA AAGGAAATGT GGAGAATAGG CACAGAACAT GAGAAATTTT GTTTCGAGGT CAAGACTTTG CGCCCTATAA AATTTGAACA AATAACTGCA CTGCTTAATG GTATTGCCGA GAGATATGAT TGGGATAAGG TGATGGAGAA AGAAAGAATC ATTGGTTTGA AACAAGGAAG CAAAAGCATT TCACTAGAAC CAGGAGGCCA ACTAGAGCTA AGTGGGGCAC CTCTAGAGAC GCTGCACCAA ACTTGTGATG AGATCCGTTC ACATCTCCAC CAAGTGAAAA CTGTTGCTGA AGAATTGGAA ATTGGTTTCT TAGGAATTGG CTATGAACCC AAAGCTAGTC TCGAGGATGT AACCATTGTG CCCAAGAGAA GGTTTGACTT TATAACAGAC CACTTAGCCA GAGCCACCAC ATCAGGACCT GACGTGATGT TCAGAACGTG TACTGTTCAG GTCAATCTAG ACTATAGCTC AGAAACCGAT ATGATCAGGA AGTTTCGCGC TAGTCTAGCT TTGCAACCTA TCGCTACAGC TATATTCGCA AATTCCCCTT TTAGTAATGG AAAACCAAAT GGGTTTTTGA GCGTGAGGAG TCAGCTATAT ACAGATTCTG ATAAGAACCG CACAGGGATG ATACCTTTTG TTTTCGATGA CTCATTTGGG TTTGAGCGGT ATGTCGAATA CGCACTTGAT ATTCCAATGT TGTTCTTATT TCGAAACGAA AGCTATCTCG ACTGTGGAGG AATGACATTT CGGGATTTCA TGTCCGGGAA AATTTCTCAT CTCTCTAATG AACAACCTAA CATTAAGGAC TGGGAACTTC ATTTAGGAGC AATATATCCA GAGGTCCGAC TAAAGAGATA CTTGGAGATG AGAGGTGCTG ATGGAGGTCC CTTGGACATG TTATGTGCCC TACCAGCTTT CTGGGTGGGT TTGCTATACG ATGAGGACTC TCTCCAAACT GTTCTCGATA TGATCGATGA TTGGACTCCT GAAGAAAGGG AGATGCTTAG GACTCAAGTT CCAATCACTG GCCTAAAGAC AATGTTTAGA GATAGGCCTT TAAAACATGT AGCAGAAGAT GTCCTAAAGC TTGCAAAGGA TGGTTTGGAG CGTCGAGGGT ACAATGAAAC CGGTTTCTTG AAAGCTCTCG CCGAGGTGGT TGGAACAGGG GTTACGCCTG CAGAGAAGCT CTTGGAGTCG TACAATGGAG ACTGGGGACA AAACATAGAT TCTGTGTTCC AGGGACTGCG GTACTGA 
Length1347
Protein Sequence
Protein Residue
Map Locationscaffold_5: 1686720.. 1689191
Download Sequence
A.thaliana
AGI-codeAT4G23100.1
Descriptionglutamate-cysteine ligase
TAIR curator summaryEncodes the enzyme glutamate-cysteine ligase catalyzing the first, and rate-limiting, step of glutathione biosynthesis. Required for cell proliferation at the root tip. Involved in susceptibility to the bacterial pathogen Pseudomonas syringae. Mutants are phytoalexin defective.
Alias[ATECS1][AtGSH1][CAD2][GSH1][GSHA][PAD2][RML1][CADMIUM SENSITIVE 2][glutamate-cysteine ligase][PHYTOALEXIN DEFICIENT 2][ROOT MERISTEMLESS 1]
Gene coexpression
MR
MR Locus Description
1 Ahg945805
9.16515 Ahg494948 Tetratricopeptide repeat (TPR)-like superfamily protein
15.2315 Ahg491894 L-tyrosine decarboxylase
19.8242 Ahg488622 HXXXD-type acyl-transferase family protein
23.9165 Ahg338247 Mannose-binding lectin superfamily protein
26.8328 Ahg485382 HXXXD-type acyl-transferase family protein
28 Ahg494165 AMP-dependent synthetase and ligase family protein
40.4722 Ahg311738 nuclear DEIH-boxhelicase
40.4969 Ahg894377 myrosinase-binding protein 2
43.4281 Ahg947914 alpha/beta-Hydrolases superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression