Detail



ID : Ahg896454

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|896454|Al_scaffold_0005_420
Sequence
ATGAGGTTGT TCGATGAAAT GCCTCAGAGA GATTCCGTGT CTTGGAACAC GATGATTTCT GGATACACAA GCTGTGGGAA ATTGGAGAAT TCATGGTGTT TGTTTACAGA TATGAAGAGA TGTGGATGTT ATGTTGATGG GTATAGTTTT AGTAGGTTAT TGAAAGGGAT TGCTTCTGCG AAAAGGTTCG ATCTTGGGGA GCAAGTACAT GGTTTGGTTG TAAAGGGAGG TTATGAGTGT AATGTGTATG TTGGAAGTTC GCTTGTTGAT ATGTACGCGA AATGTGAAAG AGTTGAAGAT GCTTTTGGGG CTTTTATGGA GATTTTAGAG CCTAACTCTG TTTCATGGAA TGCTTTGATT GCTGGATTTG TGCAAGTTCG AGATATCGAG ACTGCTTTTT GGTTGTTGGG TTTGATGGAG ATGAAAGCTG CTGTGACTAT GGACGATGGC ACTTTTGCTC CACTTCTTAC TTTGCTTGAT GATCCGATGT TTTGTAACTT GTTGAAGCAA GTTCATGCTA AGGTTTTGAA ACTCGGGCTT GAACATGAGA TTACTATATG CAATGCGATG ATCAGCTCTT ACGCAAATTG TGGTTTAGTA TCCGATGCGA AGAGAGTTTT TGATGGCTTG GGTGGCTCAA AAGACTTGAT TTCGTGGAAT TCGATGATCG CAGGTTTATC TAAACACGAG CAAAAGGAAT CTGCTTTTGA ACTATTTACT GAAATGCATA GGAATTGGAT CGAAACTGAC ATTTATACTT ACACCGGCAT CGTAAGTGCT TGCTCTGGCG AAGAACATCA GAGTTTTGGA AAGTCTTTGC ATGGTTTGGT GATAAAGAAG GGATTGGAGC AAGTTACTTC TGTTTCAAAT GCATTGATCT CTATGTATAT TCAGTTTCCT ACAGGCGTCA TGAAAGATGC TCTGTCTCTA TTTGAATCCT TAAAACCTAA GGATCTTGTC TCTTGGAATT CGATTATGAC AGGGTTCTCC CAAAATGGTC TCAGCGAGGA TGCAGTAAAG TTCTTTCGCT ACTTAAGATC TTCAAACATA GAAGTCGACG ATTACGCCTT CTCTGCAGTT CTCAGATCAT GCTCGGACCT AGCAACACTC CAGTTAGGTC AGCAGACTCA CGCTCTTGCC ACTAAATCAA GCTTCGAATC AAACGAGTTT GTAACCAGTT CTCTGATCTT GATGTACTCA AAATGTGGAG TAATTGAGAA CGCGCGAAAA TGCTTCGAGC AGATTTCTTC CAAACACAAT ACAATAGCCT GGAACGCGAT GATTCTAGGC TACGCTCAAC ACGGTTCAGG CCAAGTCTCT CTTGATCTCT TCTCTCAAAT GTGTAACCAA AACGTGAAAC TAGACCACGT AACCTTCACT GCAATTCTAA CAGCTTGTAG CCACACGGGT TTGATACAAG AGGGGCTTGA GTTACTTAAC TCGATGGAAC CGGTTTACAA AATCCAACCT CGAATGGAAC ATTATGCAGC TGCAGTTGAT CTCTTAGGCA GAGCAGGGCT TGTGAACAAA GTGAAAGAGT TAATCGAATC AATGCCATTG AATCCTGATC CAATGGTGTT GAAAACTTTC CTTGGAGTTT GCAGGGCTTG TGGAGAGATA GAGATGGCTA CTCAAGTGGC TAACCATTTG CTAGAGATCG AACCAGAAGA TCATTTTGCC TATGTTTCGT TGTCTCATAT GTATAGTGAT CTAAAGAAAT GGGAAGAAAA AGCAAATGTG AAGAAGATGA TGAAAGAGAG AGGTGTAAAG AAAGTTCCAG GTTGGAGCTG GATTGAGATT AGAAATCAAG TTAATGCCTT TAATGCTGAA GACCGATCTC ATTCTCTTTC GAAAGAGATT TATTTGATGA TTGAAGACTT GACTCAGGAA ATGCAGTGGC TTGATTCTGA TAATGGGTTT GATCAAGCTT CACTTATTGG TGTAAATTTT GTTTTTTGA 
Length1959
Protein Sequence
Protein Residue
Map Locationscaffold_5: 2442883.. 2444836
Download Sequence
A.thaliana
AGI-codeAT3G25970.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.4596 Ahg945404
28.2489 Ahg933939
54.9909 Ahg490446 RING/U-box superfamily protein
59.1608 Ahg321920
62.849 Ahg358655 pyrophosphorylase 6
73.0069 Ahg924291 cyclic nucleotide-gated channel 12
79.5424 Ahg948016
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression