Detail


ID : Ahg897024

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897024|Al_scaffold_0005_990
Sequence
GATCAGTACC TTGAGATCTC AACTTCACTA CCCAAAGACT CGTCTCTGTA TGGATTTGGT GAAAACTCAC AACCCAATGG AATCAAGCTT GTTCCTAATG AGCCTTACAC TCTTTTCACT GAAGACGTCT CGGCGTTTAA ACTCAACACC GATCTTTACG GGTCACACCC TGTTTACATG GATTTGAGAA ACGTTAGAGG TAAATCCTAC GCACACTCTG TTCTGCTTCT CAACAGTAAT GGTATGGATG TGCTTTACAG AGGCGGTTCC TTGACGTACA AGGTAATTGG AGGTGTTTTC GATTTCTATT TCTTTGCTGG ACCGTCGCCT CTCAATGTCG TTGATCAATA CACTTCGTTA ATCGGAAGGC CAGCACCAAT GCCGTACTGG TCTCTATTTC ATCAATGTAG ATGGGGATAC CGTAATGTAT CAGTTCTTGA AGAAGTGGTG GATAATTATC AAAAGGCTAA GATCCCTCTT GATGTGATTT GGAACGATGC TGATTACATG GATGGTTACA AGGACTTCAC ATTGGATCTT GTGAACTTTC CTCATGCTAA GCTATTGGCT TTCTTGGATA GAATCCACAA GATGGGAATG AAGTATGTTG TGATAAATGA TCCTGGTATT GGTGTCAACG CGAGCTACGG TGTTTACCAA AGAGGCATGG CTAATGATGT GTTCATTAAA TATGAAGGAA AGCCTTTCTT GGCTCAAATG TGGCCTGGTC CGGTTTACTT CCCTGATTTC CTCAACCCAA AAACGGTGTC TTGGTGGGGT GATGAAATCC GACGTTTCCA TGAATTAGTC CCCATTGATG GTCTTTGGAT CGACATGAAT GAGGTCTCCA ATTTCTGCTC TGGATTGTGC ACAATCCCGG AGGGGAAACA GTGTCCGAGT GGGGGAGAAC CTGGTGTGAC GTGTTGCTTG GACTGCAAGA ATATAACCAA TACGAGATGG GATGATCCAC CTTACAAGAT CAATGCTACT GGAAACAAAG CTCCTCTTGG ATTCAAGACT ATTCCCACAA GTGCTTATCA CTACAATGGT GTTCGTGAGT ACGACGCTCA CAGCATCTAC GGGTTCTCTG AGGCCATCTC GACCAATAAG GCCTTACTTG ATGTCCAAGG CAAACGTCCC TTCATATTGT CACGGTCCAC TTTTGTTGGT TCAGGTCAAT ATGCTGCTCA CTGGACTGGA GATAACCAGG GAACATGGCA GAGCTTGCAA GTATCTATCT CAACGATGTT GAACTTCGGA ATTTTTGGAG TTCCTATGGT TGGTTCAGAC ATATGTGGAT TCTTTCCTCC AACACCAGAA GAACTCTGCA ACCGTTGGAT TGAAGTCGGT GCGTTTTACC CCTTTTCAAG AGATCATGCC GATTACTATG CGCCAAGAAA AGAGCTTTAC CAATGGGGAA CAGTAGCAGA GTCAGCTCGT AACGCTCTTG GGATGAGATA CAAACTCCTT CCTTTTCTCT ACACTCTCAA CTACGAAGCC CATATGACGG GTGCACCAAT TGCTAGACCG CTCTTCTTCT CTTTCCCTGA TTACACCGAG TGCTACGGTT TGAGCAAACA GTTCTTGCTC GGAAGCAGCT TAATGATATC ACCAGTTCTT GAACAAGGTA AAACCCAAGT TGAAGCTCTG TTCCCATCAG GTTCTTGGTA CCACATTTTT GACATGACTC AGGTCGTTTA TTCCAAGAAC GGGAAGCGCG TGACTCTCCT AGCTCCGTTG AACGTTGTGA ACGTGCATCT TTACCAGAAC ACGATATTAC CGATGCAACA AGGTGGGTTA AATTCCAAAG AGGCGAGAAC AACTCCGTTT AGTCTGGTCG TCACTTTCCC GGCTAGAGCA TCAGAGGGAT ACGCCACCGG GAAACTCTTT CTTGACGATG ATGAGCTTCC AGAGATGAAA CTTGGAAACG GACAGTCAAC ATACGTTGAC TTCTACGCAT CGGTAAGTTT TGCGTTGAGA CAAGGTTTGG TGATTGAGAG AGTGATTGTT TTGGGACTTG AAGGAACAGG GCAAGTTTCT GAAATACATC TTAATGGAAG TCCAATCTCC AACGAGACCA AGAGGATTGA GGTAAGCTCC AAGGAGCAGA AGTATGTGGT GGTTTCGGAA GATAAAGGAG AGAGTAAGAG CTTCATGGTT GAGCTTAAGG GCCTTGAGAT ACTAGTGGAT AAGGACTTCA ACATATCTTG GAAAATGGCT AGTACTAATG GCGCTCATTA A
Length2241
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11707084.. 11709445
Download Sequence
A.thaliana
AGI-codeAT1G68560.1
Descriptionalpha-xylosidase 1
TAIR curator summaryEncodes a bifunctional alpha-l-arabinofuranosidase/beta-d-xylosidase that belongs to family 3 of glycoside hydrolases.
Alias[ATXYL1][AXY3][TRG1][XYL1][ALPHA-XYLOSIDASE 1][altered xyloglucan 3][thermoinhibition resistant germination 1][alpha-xylosidase 1]
Gene coexpression
MR
MR Locus Description
14.4222 Ahg474325 Mannose-binding lectin superfamily protein
20.7123 Ahg492644 Arabidopsis defensin-like protein
24.5967 Ahg938511 Plant self-incompatibility protein S1 family
26.4575 Ahg478226
32.0312 Ahg355460
39.6485 Ahg941700
42.1426 Ahg497233 Protein kinase superfamily protein
42.1426 Ahg496146 Protein kinase superfamily protein
42.2493 Ahg922613
42.8486 Ahg921734 homolog of Brassica campestris pollen protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression