Detail



ID : Ahg897125

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897125|Al_scaffold_0005_1091
Sequence
ATGGGGAGAT CCGTCCCGGA GCAAGATAAC ATTGCCATGC TAATGAATGA TGTGCAACGC ATGAGACAAC AATTGTCATC TAGTAATCCC ATTCTGGTGA CTAGAGATCA AATTAGCTTT GCTTATAAGC TTGCAATGGA AACAGTAGCT TCGGATATCA GCATACGTAT GCCTGCGACT TGCAGCATCT GTTTCAATGA TGATTTGGAA GCTGAGCAGA TGTATTCTGT TCCCTTATGC GGTCATCAAT TCTGTGTCGA GTGCGTGAGA CGACATATAG AAGTGAGGCT ACTCGAGGGA AGTGTACCGA CATGTCTTCA TTATCAATGC GAGTCTAAGC TAACTCTTAG AAGTTGTGAC AATCTTTTAA CACCTAAACT AAAAGCGATA TGGGAACAAA GGATCGAAGA GGAATTGATT CCTGTGCCGG ATAGAGTTTA TTGTCCAAAA CCGACGTGCG CGGGATTAAT GTCGAAAACC GAGCTTTCTA CCTCAACTGA AGAAGATGAA GGTAGTAGGA GTTGTTGTGT CAAATGCGGT GAACCCTTTT GCATCAACTG CAAAGTTCCG TGGCATAGTA ACTTGTCATG CGATGATTAC AAGAGATTAG GTCTGAATCC TACAACAAAT GATGAAAAAC TAAAAGTTCT AGCAAATCAG AAAATGTGGC GTCAATGTGA AAAGTGCAAA CACATGATCG AACTTTCGAA AGGATGCATC CATGTAACTT GCAGGTATCA TCACCATATC TTAATCACAT TATCTAATCC TTTTGAATTT GATTATGTTT TCGCCTAA 
Length798
Protein Sequence
Protein Residue
Map Locationscaffold_5: 9882113.. 9895630
Download Sequence
A.thaliana
AGI-codeAT3G43750.1
DescriptionRING/U-box protein with C6HC-type zinc finger domain
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.2478 Ahg315981 ubiquitin carrier protein 1
47.0213 Ahg484096 RING/FYVE/PHD zinc finger superfamily protein
49.7996 Ahg489897 Subtilase family protein
52.2494 Ahg924973
54.2771 Ahg482576 HVA22-like protein J
60.5805 Ahg316828 cytochrome P450, family 79, subfamily C, polypeptide 1
78.613 Ahg494361 Protein of unknown function (DUF295)
81.3326 Ahg933796 CCT motif family protein
83.6062 Ahg478645 myb domain protein 10
84.214 Ahg357471
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression