Detail



ID : Ahg897463

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897463|Al_scaffold_0005_1429
Sequence
ATGATTGATT ATTATATTCC TCCTCTTCCT CCTGTCAACC ACTGTACCAC AACGCTCACG TTATCGGAGC TCTGTCTTGC TAGAGCCAAC TTTGTTAATA GCAATGAAGC ATCAGAGCAA GCATTGTGTG CCGTTGCTGT AACGGAATCA TCACCATCCG CTCTACCAGC ACCTCGAGAT CGTTGGTTCG ATCGGTCACT GTTACCTTCG GATCTATCAT ATGGTTTCAA GTAA 
Length234
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12036431.. 12036664
Download Sequence
A.thaliana
AGI-codeAT3G11410.1
Descriptionprotein phosphatase 2CA
TAIR curator summaryEncodes protein phosphatase 2C. Negative regulator of ABA signalling. Expressed in seeds during germination. mRNA up-regulated by drought and ABA.
Alias[AHG3][ATPP2CA][PP2CA][ARABIDOPSIS THALIANA PROTEIN PHOSPHATASE 2CA][protein phosphatase 2CA]
Gene coexpression
MR
MR Locus Description
1 Virus3963
1.41421 Ahg913866
1.73205 Ahg933952 F-box and associated interaction domains-containing protein
3.16228 Ahg905975 stomatal cytokinesis defective / SCD1 protein (SCD1)
3.4641 Ahg900335 acyl-CoA binding protein 5
3.74166 Virus0670
4.12311 Ahg897825
4.24264 Virus2027
7 Ahg895524
8.94427 Ahg312606
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression