Detail



ID : Ahg897524

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|897524|Al_scaffold_0005_1490
Sequence
ATGATCGCCG ACGCCGTTTC TAAGTCTGAC CACAAAAGGG ATGCATATGG ATTTTCTGTG AGGCCTCAGC ATGTGCAAAG ATACCGAGAA TATGTTAATA TCTACAAGGA GGAAGAAGAG GAGAGGTCGG CCAGGTGGAA CAATTTCCTG GAAGATCATG CAGAATCTGG CGTGTCGAAT GGATCGTCTG AAAATAATCA TGTCAATCCA AGTGAAAGTG ACAAGAAAAT AGAAGAGGAA TCAAACAAGG GTGCTGAAAG AAAAGATCTG AATACTGAAA AGCCAGGTTC TGATTTAAAT CCTGGGAATG CGAGAGAGGA AGATGAGGTT CCCAATGCAG AGAAAAATGT GCACAAAGTT CTGTTGTGGG CTGAGATCAG ACCATCTCTT CAAGCAATTG AGGACTTGAT GAGTGTCCGT GTCAAAATAA AGGGGGATTC CACAAATGGC GAGCAAGAAG CTCAGAAATT GAATTCCTTA CCCTCTACTG ATGAGACCAA ATCTTCAAAG GGAGTGTCTG AGAATGATTC TGAAGATGAG TTCTATGATG TGGAAAGATC AGATCCAATT CAGGATGGTT CTTCAGATAG TACAAGTGTC TCCAGCATGT CTGCTGCTGC TGATGCAACT TCCCTAATAT CTGCATGCCC CTGGAAGGAC GAACTTGAAG TTCTTGTTCA TGGCGGGGCA CCTATGGCTC TGAGGGGTGA GCTCTGGCAA GCATTTGCGG GAGTCAAGAA ACGTCGGGTC AAGAATTATT ACCAAAATCT GCTAGCTGCT GATAGTCTAG GAAACGACAT AGAGCAGGAG CACATGCAGC ATGCAGATGA GAAAGGTTCA AGTACAGACC CCATCGCTGT TGTAGAAAAA TGGAAAGGAC AGATAGAAAA GGATTTACCC CGGACATTTC CAGGTCATCC TGCCCTAGAT GATGATTTCA GAAATGCTCT GCGGCGATTG CTAACTGCCT ATGCTAGGCA TAATCCCTCT GTTGGATACT GTCAGGCAAT GAATTTCTTC GCTGCACTTT TATTACTTCT GATGCCCGAA GAAAATGCCT TTTGGTCGCT TATAGGAATC ATTGATGACT ACTTCCATGA TTATTATTCA GAAGAGATGA TCGAATCCCA GGTTGACCAA CGAGTTCTGG AGGAGTTGCT TCGAGAGCGA TTTCCTAAAT TGGTTCATCA TCTAGATTTT CTTGGAGTCC AGGTGGCTTG TGTTACAGGG CCATGGTTTC TTTCCATCTT CATTAATATG CTTCCATGGG AAAGTGTTCT CAGAGTGTGG GATGTGCTTC TATTTGAAGG AAATCGTGTT ATGCTTTTCA GAACAGCACT CGCATTGGTG GAATTTTACG GTCCTGCATT GGTTACAACC AAGGACACTG GAGATGCTGT TACTTTGTTA CAGTCAATGA CTGGTTCAAC ATTTGATAGC AGCCAGCTCG TTTTCACTGC TTGCATGGGG TACCAAAGTG TACATGAAAG TAGATTGCAG GAACTAAGAA GCAAACACAG GCCAGCAGTA ATAGCTGCAT TTGAGGAAAG ATTAAAGGGG CTTCAAGCTT GGAGGGATTC AAAAGGCCCT GCGACCAAAT TACATAATTC TAAGCAAGAC CCAAATTCTG TTTTAGCTAG CAAAGCCTCA TCGTCAAATG GGAGTTTATC TCGTTCTGAA TCAGGATCCA GTTATGCAGA CGACGTCTTT ATTAGCCTGA CTGGGGATGG TGAGATAGAT TGTTTTCAAG ATCTTCAAGG ACAGTTGGAG ATAGCTCTCA TGGAGATGGT CAAACAAGAT AATCGACGTC AACTGAAGGC TAAGATTGAG CAGTTAGAGC AAGAGGTGAC AAAGCTTCGA AGACTTGTTT CTGATAAGAG GGAACAAGAA GGTGCTAACT ATGATACAGA CCACTTGAAA TTTATGAAGG TCTTGATGCG GATGGAGCAA GAACATAAAG TAACAGAAGA TGCACGGAGA CTTGCTGAGC AGGATGCAGC AGCTCAGAGA CATGCTGCTG AAGTGCTTCA GGAAAAGTAT GAAGAAGCTG TTGCAGCGCT CGATGAGATG GAGAAGAGGG CAGTTATGGC AGAGTCCATG TTGGAGGCGA CTTTGCAGTA TCAATCTGGC CAAGTTAAAG CACAACCTTC ACCACGGTCT GTTTCTCAGG CATATATCAA AACTCTACAT ATCAAAAACC TAAGGAGCAA GTTAATGACG CGAAGTCATC AACAGAAGGA CAAAACACAA ACTTCATAG 
Length2259
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12255865.. 12260905
Download Sequence
A.thaliana
AGI-codeAT2G39280.2
DescriptionYpt/Rab-GAP domain of gyp1p superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
32.2025 Ahg483497 Actin-binding FH2 (formin homology 2) family protein
36.5377 Ahg940652 Glycosyl hydrolases family 31 protein
43.0581 Ahg474805
46.9255 Ahg923384 presequence protease 2
55.5608 Ahg492954 chromomethylase 2
58.2752 Ahg347878
70.9577 Ahg916526
84.8705 Ahg488363 homeobox protein 30
86.0814 Ahg490276 Pentatricopeptide repeat (PPR) superfamily protein
89.23 Ahg477918
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression