Detail


ID : Ahg898261

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|898261|Al_scaffold_0005_2227
Sequence
ATGTCTATCT TCCTAGGTTT CCTCTTCCTT TTCCCTCTCT TTTTGATCCT CTTTAAAAAG CTTTTACCTT CGAAAAGGAA GCTTCCTCCA GGACCTAGAG GTCTCCCGAT CATAGGAAAC TTGCACCATC TTGGAAGATC ACTTCACAGT GTTTTTCACA AGCTCTCTTT AGAACATGGA CCAGTGATGC TTCTCCATTT CGGAGTTGTC CCTGTGGTCG TCTTCTCTTC CAAAGAAACA GCTAAAGAAG TTCTCAAAAC TCATGACCTA GAGACTTGCA CCCGACCTAA GCTGGTGGCG AATGGGTTGT TTTCTCGCAA CTTCAAAGAC ATTGGTTTCA CTCAGTACGG TGAAGACTGG CAAGAGATGA AAAAGCTGGT GGGGCTCGAG CTCTTTAGTC CGAAAAAGCA AAAGTCTTTC AGGTATATCA GAGAAGAAGA AGGAGACTTG CTGGTCAAGA AAATATCAAA ATCCGCTCAA ACACAAACCC TAATAGATTT GAGAAAAGCC TCTTTCTCCT TCACCGCTGG TACCATCTTT AGACTAGCCT TTGGACAGAA CTTCCACGAG TGTGATTTCA TCGATATGGG CAGACTTGAA GAGCTGGTGC TAGAGGCGGA AACCAACGTT TGCATCTTGG CACTCACTGA CTTCTTACCC ACGGGTCTTG GTTGGCTTGC AGACCGGATA TCTGGTCGAC ATTCGAGGAT GAACAAAGCC TTTTCAAAAC TCACCAATTT ATTTCAACAT GTGATCGATG AGCAATTAAA GATTGGACAA CTCCAAGATC ATTCCAACCT CGTCAGTGCC ATGTTGGATA TGATCAATAG ACCCTCTAAA TTCAGTTCTT TCAATATCAC TTCCAACCAT CTCATAGCCA TGATGTCGGG TGTGGTTTTG GCCGGAGTGA ACGCGGGAAC AATCACGATG GTATGGATAA TGACAGAACT AATCAGACAT CCAAGGGTGA TGAAAAAACT CCAAGCAGAG ATTCGAACAA CACTCGGATC CAACAAAGAG AGAATCACAG AAGAAGATCT ACAGAAAGTC GAGTACTTGA AGCTTGTGAT CAAAGAAACA TTCAGATTAC ATCCACCATC TCCTCTCTTG CTACCAAGAG AAACAATGTC CGATATCGAG ATTCAAGGCT ACCACATTCC CAAGAACGCC CTTATCAGGA TCAACACTTA CACGATAGGA CAATTCAATC CTGAGAGGTT TTCGAATACC TCGATCAACT ACAAAGGTCA GGATTACGAG CTCTTGCCAT TTGGAGCAGG CCGTAGAAGC TGTCCTGGTA TGAACTTGGG AATCACCATT CTTGAGCTAG GCCTTCTTAA CATTCTTTAC TTCTTTGATT GGAGTTTGCC CAATGGAATG ACCATTGAAG ACATTGACAT GGAGGAAAAC TGA
Length1413
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15627022.. 15631092
Download Sequence
A.thaliana
AGI-codeAT5G35715.1
Descriptioncytochrome P450, family 71, subfamily B, polypeptide 8
TAIR curator summaryencodes a protein with cytochrome P450 domain
Alias[CYP71B8]["cytochrome P450, family 71, subfamily B, polypeptide 8"]
Gene coexpression
MR
MR Locus Description
1 Ahg493905 FBD / Leucine Rich Repeat domains containing protein
7.28011 Ahg947383 Family of unknown function (DUF577)
23.3238 Ahg951005 Plant invertase/pectin methylesterase inhibitor superfamily protein
25 Ahg943715
26.0192 Ahg940669
31.4325 Ahg489145 cation/H+ exchanger 3
33.5857 Ahg931789
40.6202 Ahg900035
45.0333 Ahg334832 HCO3- transporter family
49.7092 Ahg355455 DNA (cytosine-5-)-methyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression