Detail



ID : Ahg334832

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|334832|fgenesh1_pg.C_scaffold_1001397
Sequence
ATGGAGGAAG AAAGACTGGA TAGCTCGAAG AGGCTATTTA GAGGTATCGT AGCAGATCTT AGAGGAAGAG CCTTGTGTTA CAAGGAAGAC TGGGTCGCTG GTCTCCGTTC TGGTTTCGGG ATTTTAGCTC CCACAACATA TATTTTTTTC GCTTCTGCGC TTCCGGTTAT CGCCTTTGGC GAGCAACTCA GCCGCGACAC AGAGGGAGCG TTGAGCACAG TAGAAACGTT AGCATCAACA GCGTTATGTG GAGTGATACA CTCAATTTTG GGAGGGCAAC CATTGTTGAT ACTTGGAGTT GCAGAACCAA CTGTGTTAAT GTACGTTTAC TTGTACAACT TCGCTATAGG AAGACCAGAA TTGGGCAAAC AACTCTACTT AGCTTGGGCT GCTTGGGTTT GTGTGTGGAC GGCTCTGTTA CTGTTCCTTA TGGCGATCCT TAATGCGGCT GATATCATTA ACCGGTTTAC GAGGGTTGCT GGTGAGCTGT TCGGTATGTT GATATCCGTT CTGTTCATCC AACAAGCCAT TAAGGGTATG GTGAGTGAAT TTGGGATGCC AAAAGATGAG GACTCAAAAC TAGAAAAGTA TAGGTTTGAG TGGCTCTATA CAAACGGACT TCTCGGCCTC ATTTTCACCT TTGGCCTTCT CTACACCGCT TTGAAGAGTC GAAAAGCAAG GTCTTGGCGA TACGGAACAG GATGGTACAG AAGCTTCATT GCAGACTATG GAGTTCCTTT GATGGTTGTG GTTTGGACAG CATTGTCTTT TAGTACGCCA TCAAAACTCC CCTCTGGTGT CCCAAGAAGA CTCTTTAGTC CTCTGCCATG GGACTCTGCT TCTTTATCAC ATTGGACTGT CATCAAGGAC ATGGGGGAAG TCTCTCCGGG TTACATATTC GCGGCATTTA TACCCGCATT GATGATAGCA GGGCTCTACT TCTTTGACCA CAGCGTTGCC TCGCAGCTCG CTCAACAGAA GGAGTTCAAC CTCAAGAAGC CTTCGGCGTA TCACTATGAC ATTCTCCTGT TGGGTTTCAT GACGTTGATC TGTGGATTGC TCGGTCTGCC TCCTTCCAAC GGAGTCCTTC CTCAGTCTCC TATGCATACC AAAAGCCTTG CTGTTCTTAA ACGACAGTTG ATCCGGAGGA AGATGGTAAA GTCGGCCAAA GAAAGCATCA GGAAGAGAGA AACTTCCTCA CAAGTGTACG AGAATATGCA AGAAGTCTTC ATAGAAATGG ACAAAAGTCA TCTTGCTCAG ACAGATCTAG CAGTGATAAT TGAGCTGCAA GATCTGAAAG AAGCAGTAAT GAAGAGCAAT GAGGAAGAAG GAGAGGGAGA CAAGGAGAGT GGTTTTGATC CAGAGAAGCA CCTTGACGCT TATTTGCCTG TTAGAGTCAA CGAGCAGAGA GTGAGCAACT TGTTGCAGTC ACTGCTGGTG GCAGGTGCAG TGTTGGCAAT GCCGGCCATT AAGCTCATAC CTACTTCCAT TCTATGGGGA TACTTCGCTT ACATGGCCAT CGATAGCCTC CCGGGAAATC AATTCTTCGA ACGCACAATG CTTCTCTTCG TTCCAACAAG CCGGAGATTC AAGGTCTTGG AGGGAGCACA CGCGTCGTTC GTGGAGAAAG TTCCGTACAA GTCAATGGCT GCGTTCACAC TGTTGCAGAT ATTCTACTTT GGGCTGTGCT ATGGAGTGAC GTGGATTCCG GTGGCTGGAA TCATGTTTCC TGTTCCTTTC TTCCTCTTAA TAGCTATCAG ACAGTACATT CTCCCGAAGC TCTTTAACCA GGCCCATCTG CGAGAACTTG ATGCCGCTGA GTACGAAGAA ATCCCCGGCA CTCCTAGAAA CCCGCTCGAA CTGTCTTTCC GGTCGAATGA CTCGAAGAGA GGTGTCCAAG AAGGGGATGC TGAGATTTTA GACGAGTTAA CGACAAGCAG AGGCGAGCTT AAAGTCCGCA CAGTCAGTCT TAACGAAGAC AGAGGCAACC AGATTTACCC CAAGAAGACA GTAAATGCAG GAGACGGGGA CATGAGCACG ACAAGAGAGT GA 
Length2052
Protein Sequence
Protein Residue
Map Locationscaffold_1: 6224364.. 6227659
Download Sequence
A.thaliana
AGI-codeAT1G15460.1
DescriptionHCO3- transporter family
TAIR curator summaryEncodes a efflux-type boron transporter. Over-expression improved plant growth under B toxic conditions.
Alias[ATBOR4][BOR4][ARABIDOPSIS THALIANA REQUIRES HIGH BORON 4][REQUIRES HIGH BORON 4]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg929024 Basic-leucine zipper (bZIP) transcription factor family protein
4.89898 Ahg919859 P-glycoprotein 10
5.09902 Ahg917658 subtilase 4.13
8.12404 Ahg351609 Protein of Unknown Function (DUF239)
9.27362 Ahg910203 Peroxidase superfamily protein
9.53939 Ahg482160 uclacyanin 1
9.79796 Ahg890578 HSP20-like chaperone
10.583 Ahg357417 Protein kinase superfamily protein
11.6189 Ahg473700 transposable element gene
11.6189 Ahg936672 Protein of unknown function (DUF1216)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression