Detail



ID : Ahg898471

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|898471|Al_scaffold_0005_2437
Sequence
ATGAGGATTG ACGACTCCAT CGCTGCTTTC TCTTTGGCTT TAGCTTTCCA TAACGCTCAC ATGAGAAACA TGGTTACATC CCATTCTATG TATTTCGTTA TTACCATTAC ATTGCTTTTC AGTGGGATTT TTGAATCTTG TAACACCACG AAGCTCCACG ATGTTGAAGT GAGAGCACTG AAAGAGATAG GAAAGAAGAT GAAGAAAAAA GATTGGGACT TTAGCAATGA TCCATGCAGT GGAAAAGGGA ATTGGATTGT AAACACTAAT CCACTTATAA ATAGTAATCT CACCTGTGAT TGTTCTTTTC ATCCTCCTAA TTCATCGTGT CACGTTATCG CAATAGTTTT GACGTCGCAG AATTTGACAG GCATTATACC CCCAGAATTC TCTCAGCTGC GTTATCTCAA AACTCTGAAC CTTGACCGTA ATTGTCTTAC TGGCTCAATT CCTAAGGAAT GGGCATCAAT GCATTTAGAA AGCTTGAACC TTGAGGGAAT ATGTTCTAAC AAATTTAGTC ATTTGAAATT GTACAGGAAC CTTGAGGGAA ACAGATTTTC AGGACCAATC TCTCCCGAGA TTGGAAAGTT GGTTAATCTG AAACAATTAT TTCTCTCTTC AAATTCCTTT ACGGGTTATT TGCCAGAGCA ACTCGGACAA CTTAGAAAAT TGACTGATAT GAGGATTAGT GATAATGCAT TTACTGGTCA GATACCAAAT TCCATTGGAA ACTGGACACA GTTATCTCAT TTCCAGATTA GCGATCTAGG AGGAAAATCG TCTTCCTTTC CTCCACTGCA GAATTTGAAG TCTCTCAAAA CATTGGAGTT GAGGAGATGC AACATATACG GACAAATTCC TAAATATATT GGAGATATGA CGAGTCTCAA AACACTAGAT ATATCTTCCA ACAATTTCAC CCTCCAGAGT TCAATTCCTA GTGGTGATTG TGACCAAGGC TACCCTTGTT ACTTCCAACA CTTCCCTTGC CTTTTGCCTA AAAGAGAGTA CAAATATAAG CTGTACATAA ACTGTGGGGG AGATGAAATA AAAGTTAAAG AAAAGACATA CGAAGCTAAC GTAGAGGGTC AACGACCAAC TACATTTGTC TATGGCTCTG ACAAGCACTG GGCATTTAGC AGCACCGGAC ACTTCATGAA TGATCTTACA GAAGTGGATG ACTACACCGT GTCTAACACC TCTACACTAT TAGCTGATGC TTCGTCTCCA AGTTTCGTGT TGTACAAGAC GGCTCGGATT TCTCCTCTCT TGTTGACTTA CTACGGACTC TGTCTCGGCA ATGGGGAGTA CACTGTGAGT CTCCACTTCG CAGAGATAAT ATTTACCAGC GACAATACAT TCTACAGTCT TGGGAAAAGA GTGTTCGATA TTTATGTTCA GGATAAGTTG ATGATTAAAA ACTTCAACAT TAAAGAAGCT GCTGGTGGAT CGGGGAAGCC AATCATAAAG ACATTTTTGG TAGATGTAAC AAATCACAAT CTGAAGATCA GCTTGAGGTG GGCTGGCAAA GGGACAACTA CGCTTCCAAT TAGAGGAGTT TACGGCCCTA TGATCTCAGC CATATCAGTT GAACCTAATT TTAAATCTCC GGAGCATGAT GACAAGAAGA ATATCCTACT AATAGTAGGA ATTATAGTTG CCGCAGTAAT CCTCATTGTG GTCATCATCA CAGTGATCAT TTGCTTGTGG AAAAGAAGGT GTTACAAAAA TGCAATGGAC AAAGAGCTGA GGGGTTTAGA TCTTCAGACT GGAACCTTCA CTCTTCGACA TATAAAAGCG GCCACTAATA ACTTTGATGC AGCAAACAAG ATTGGTGAAG GTGGATTTGG CTCTGTTTAC AAGGGTGTGT TATCCGAGGG GAGGACGATT GCGGTTAAAA AATTGTCTTC AAAGTCCAAT CAAGGAAGCC GAGAGTTTGT GAATGAATTA GGGATGATCT CATCTCTACA ACATCCAAAT CTTGTGAAAC TATATGGATG TTGTGTGGAG AAGAAGCAAC TGATATTGGT CTACGAGTAT TTGGAGAACA ACTGTCTTTC TCGTGCTCTA TTTGGATCGA GACTGAAATT AGAATGGCCA ACAAGGAAGA AGATTTGTTT GGGCATAGCT AAAGGACTAA CATTTCTCCA TGAAGAATCT GTGATCAAGA TTGTGCACAG GGATATTAAA GCGAGCAACG TGTTGCTAGA TGAGGATCTC AATGCCAAAA TCTCTGACTT TGGTTTGGCA AAGCTGAATG ATGATGAAAA CACGCACATC AACACTCGTA TCGCCGGAAC ACCAGGATAT ATGGCTCCGG AATACGCCAT GCGGGGTCAT TTGACCGAAA AAGCAGATGT TTATAGCTTT GGCGTCGTTG CCCTTGAAAT CGTCAGTGGA AAGAGTAACT CAAACGTCAA ACAACCAAGC GAGAACTTGG AGTGCCTTCT TGATCAGGCC TACGTTTTGC AAGACATGGG ATGCTTACTA GACTTGGTTG ACCCAGTGCT AGGTTCAGCT TACTCAAAAG AGGAAGCAAT GGTGATCTTG AACGTGGCGC TAATGTGCAC TAACACGTCC CCGGCGTTAA GGCCAAAAAT GTCGCAGGTC GTGAGTCTCC TCGAGGAAAA GACCGCAATG AAAAACCTGT TGTCGGACCC AAACTTCTCA GCAGTGAACC CGAAGCTGAA GGCTTTAAGG AGATTCTTTT GGCAGAGCGA ATCATCCACA AGCGGACCTC GTACCACTGA CTCTGTTGAT GCTGAAGAGA ACACATCAAA AGACGAAATA GTAGAAGAAC CAGAACTTGA GTGTGAGTAA 
Length2820
Protein Sequence
Protein Residue
Map Locationscaffold_5: 16469409.. 16475332
Download Sequence
A.thaliana
AGI-codeAT1G07650.2
DescriptionLeucine-rich repeat transmembrane protein kinase
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.2788 Ahg936150 F-box family protein
17.8326 Ahg943595 copper ion binding;electron carriers
32.6803 Ahg952263 copper ion binding;electron carriers
34.4093 Ahg483104 LOB domain-containing protein 15
35.1568 Ahg949069 transposable element gene
36.8239 Ahg318939 TRAF-like family protein
39.3065 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
55.5608 Ahg913614 gibberellin 20-oxidase 5
63.5531 Ahg484914 transposable element gene
77.201 Ahg913186
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression