Detail



ID : Ahg898884

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|898884|Al_scaffold_0005_2850
Sequence
ATGGTATTTA TCGAGAATGC ATCTCTAGGT GGATATCAAA TGTCATTGAA CGTGGGGTAT CGGAACTTGA TTTACGCGAT GTTTTTCTTC CAAACCTTAA GACTCCATCT TGGTTCTGTT TGGTTTGGAG AGGGTGATAC TGGCCTTCTC AAGCTTATTT CTGGATGTCA TGTCCTTGAG GAATTAACTA TGATTCATCT ATGGTGGGGT GGTTATTGGA ACCGCTCTGT GTCTTCCAAA ACCCTTAAGA GACTTACGGG ACTCCATCAC AAACATACAA TTAAATGTGA GGACGCTGAC GGGTGTCTAT GCAAATCTTC AAAGGAAATT TGTAGTTGCC TATCATCAAG TCCGGTGAAG GTTCTGAAGA TACTCAAGTT TGGCGAAGTT TCTTCTTACT TTGATGACGA GGAAAAGCAG CTGGAGCTAG TCAAGTATTT CCTGGAGACA ATGCCGAATC TTGAACAGAT GATATTGTGT TACAATACAC GAATTGATGA AGGTGTGAAA AGTCAACTTG AGAGGCTAGT TCCTAGAGTA TCTTCATCGA AGTGTAGTGT CCAACTAATC TGTGATAACT TCATCGCACC AACTTATCCT TTCTATGGTA TCGTACCAGC ACCATCTTAT CCTGTCTATG AAATCACTCG TCCCGCCACA TATCCATCTC ACTCTAGGTC ACAAGCAAAA ACCCTAATGT TCTCTTTCAC TTCCCTCTCG CAATCGAGTT CTCAATATTC GTGTGATTTT TATGCGCTCA ACAAGTCGCT GGTTAAGCTG AGAATAGGAG CCAGAAATGG TCTCGCCGTT GGAGGTCTCA TCATGAAAGT GGGAGATGTT TCCCTTCCAA AGCTCAAGAC TCTCTGTCTT GATTCGGTTG TGTTAGATTA CCAGATAATT TGTTTGGCTA AGCTTCTTTC AGGTTGTCAT GTCCTTGAAC AATTAGCTCT GGTTAATCTT AGTTGGAATT TTTGGGAGTA TTGCTCTGTG TCTATCCCAA CCCTCAAGAG ACTAACGTGT TGTATTGAGG AGGATTGGAT CAACCCACCA CCGAGTGTCA CATTTGATAA TCCGGCTCTT GTCTACTTTG AATATACCGA TACTGTTGCG TTAAAGTACG AAAAAGTGAA TTTCGATTCG CTCGTTGAAG CTAGGCTCGG TCTTCGAGTG GCATATGAAG AGACAGAAAA TCCAATAGAG TTCCCTGATG GCATCCCCTT CCCAGTTATA GAATATGTTA CGGTCGGTGA TGCAACTGAT CTACTTATGG GATTACGCAA TGTTCAGGTT CTTTACTTAT ATGCGAGCAC TCTTGAGGTT CTAAAGATAT TGAAGTTTGG GGAAGTTAAT GACAAGACAG AATTAGAGCA AATCAAGCAT TTCTTGGAAT CAATGCCGTT TCTTGAACAG CTCAATATAT ACTACGATAC ATCAGTTGAC GATAATCTTG TTAAAGTATC CAAGCAACTT CAGGAAATTC CTGGAGTAGC TTCAGCAAAG TGCAAGGTCC AAGTAATCTC CGATAACCTC ACCTTCTCAG TTACTTTACC CTCTTCCTCA TCGATTTAA 
Length1569
Protein Sequence
Protein Residue
Map Locationscaffold_5: 18212143.. 18213127
Download Sequence
A.thaliana
AGI-codeAT3G59230.1
DescriptionRNI-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
15.2971 Ahg943128
15.6205 Ahg941356 ARM repeat superfamily protein
17.2337 Ahg485821 alpha/beta-Hydrolases superfamily protein
17.7764 Ahg897183 Polynucleotidyl transferase, ribonuclease H-like superfamily protein
20.9284 Ahg942093
23.0434 Ahg933736 Domain of unknown function (DUF313)
23.6643 Ahg490879 cytochrome P450, family 81, subfamily F, polypeptide 4
24.8596 Ahg926320 Protein of unknown function (DUF1163)
27.0185 Ahg495243 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
28.8791 Ahg931712
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression