Detail



ID : Ahg899853

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|899853|Al_scaffold_0004_503
Sequence
ATGAGAGTTA TCTTCGTCGC CTTGCTCTTC TTCTTCTCTG TGTTCTTTGT TGTACTCAGT AGAGGACAGA ACAAAAAAAC AGAAGTCAAT GTGGGTATTG TAACAGATGT CGGGATGATG CATTCAGACA TTGAAATGCT CTGCATCAAC ATGTCTCTTG CAGATTTCTA CTCTTCTCGT CCCCATTTTC GGACAAGGAT TGTCGTCAAT GTCGGCGACT CAAAAAAGGA CGTTGTAGGT CTTGAGCTGC TCAAGAACAA TGAAGTGAAA GCGATTTTGG GGCCATGGAG TTCAATGCAA GCTCATTTCT TAATCGAGAT TGGCCAAAAA TCCCGGGTTC CGGTTGTTTC TTACTCTGCA ACAAGCCCAT TTCTTACTTC TCTTCGTAGT CCATACTTCT TTCGTGCTAC ATACGAAGAC TCCTTTCAAG TGTACACCAT AAGAGCTATC ATCAAGTTGT TTGGTTGGAG GGAAGCCGTG CCTGTTTATA TCGACAACAG CTTTGGAGAA GGTATAATGC CTCGTCTCAC CGATGCATTA CAAGAGATTA ATGTTCGAAT ACCTTACAGA TCTGTCATTG CGTCCAATGC CACAGATCAT GAAATCTCTG TGGAGCTTCT TAAGATGATG ACTATGCCCA CAAGAGTGTT CATTGTACAC ATGTACTCTT CTCTTGCCTC AAGAGTCTTC ATTAAAGCTA GGGAAATTGG TTTGATGAAA CCAGGATATG TCTGGATCCT TACCAATGGC GTAACCGATG AATTGAATTG GATAAGTGAG ACAGGTATTG AGGCTATGGA GGGGGTATTG GGTGTTAAAA CTTATATTCA GAAATCCAGA GAACTTGAAA ATTTTAGATC TCGATGGAGG AAGAAATTTT CACGGATGGA GCTGAATGTC TATGGATTGT GGGCTTATGA TGCTATCACC GCACTGGCGA TAGCCATTGA AGAAGCTGGA ACAAATAACT TGACTTTCAG TAATGTGGAT CTTGGAAGGA ATGTTTCTGA ACTTGAAGTT CTTGCTTTAT CTCAATATGG TCCAAAGCTT CTCCAGACAC TCTCAACAAT TCAGTTCAAA GGACTTGCAG GAGATTTCCG TTTTATCAAG GGACAACTGC AACCATCGGT GTTTGAGATT GTTAATATGA TTGGAAATGG AGAAAGGTCG ATAGGATTCT GGACCGAGGA AAATGGTCTT GTAAAGAAAC TAAACCAGCA ACCGAAGAGC ATGAACGCTT TATCTACTTG GAAAGACCAT CTTAAAAACA TTCTATGGCC TGGAGAGGCT GATTCTGTTC CCAAAGGATG GGAGATGCCG ACAAATGGGA AGAAGTTGCG CATTGGGGTT CCAAAGAGAA CCGGTTACAC CGATCTTGTG AAAGTCACAA GGGATCCTAT CACCAATTCA CCAGTAGTCA CAGGTTTCTG CATTGATTTC TTTGAGGCTG TGATTCGAGC AATGCCTTAT GACGTTTCGT ATGAGTTCAT TCCGTTCGAG AAACCCAATG GTAAACCAGC CGGTAATTAT GATGATTTGG TCCACCAAGT GTACCTCGGG AGATATGATG CTGTTGTGGG AGATACAACC ATACTGGCGA ACAGGTCCGC TTACGTCGAC TTCACATTCC CATTCTTTAA ATCAGGCGTA GGATTAATCG CCCCCATTAA AGACCAAGTG AAACGAGACA GTTTCACTTT CTTGAAACCT TTGTCATGGA ATCTATGGTT TACTTCCTTC GTCTTCTTCT TCCTTGTTGG AATTACTGTT TGGGCTCTTG AACATAGGGT TAACCCGGAC TTCCGTGGAC CTGCTAATTA CCAAGCTAGT ACTATCCTCT GGTTTGCCTT CTCTACCATG GTTTTTGCTC CAAGAGAAAG AGTGTTTAGC TTCGGGGCTA GGTTCCTGGT TATCGCATGG TACTTCGTTG TTCTCGTGTT GACTCAGAGT TATACAGCCA GTTTGGCATC GCTTTTGACA TCACAACAAC TTCATCCAAC CATAACCAGC ATGAGTAGCT TGCTTGAGAG AGGAGAAACA GTGGGTTATC AGAGAACATC CTTCATTCTT GGAAAGCTTA AAGAAACAGG TTTCTCACAA TCTAGCCTTG TTCCCTTTGA CACCTCTGAA GAATGCAACG AGCTTTTGAG GAAAGGATCA GAAAAAGGCG GTGTGTCTGC AGCTTTCTTG GAAATACCTT ACTTGAGACT CTTCCTTGGA CAATATTGCA ACACTTATAA AATGGTTGAA GAACCCTTCA ATATCGATGG ATTTGGCTTC GTTTTTCCGA TCGGATCACC TATGGTGGCC GATGTTTCAA GGGCTATCTT AAAAGTAGCA GAGTCACCAA AGGCGATGGA GCTTGAGCGC GCATGGTTCA AGAAGAAAGA AGAACGTTGT CCAGACCCAG TCACTAATCC AGATCCAAAT CCATCTTTTA CCTCTCGGCA GCTCGGTGTA GACAGTTTCT GGCTTCTATT TCTTGTTGTA TTTGTTGTGT GCATTCTAAC ACTCGGAAAA TTCACATTAT GTTTCCTTTG GAAGAGCAAA GGGAATGATT TGTGGGAAGA GTTTCAACAA CCAGACAATG ATTCCTACAT CAACAAGGTA GAGAAATGTC CGTGTTCGTC GAGTGAGACA CATGCTTGA 
Length2649
Protein Sequence
Protein Residue
Map Locationscaffold_4: 2997359.. 3000441
Download Sequence
A.thaliana
AGI-codeAT2G24720.1
Descriptionglutamate receptor 2.2
TAIR curator summarymember of Putative ligand-gated ion channel subunit family
Alias[ATGLR2.2][GLR2.2][glutamate receptor 2.2]
Gene coexpression
MR
MR Locus Description
2 Ahg924092
3.74166 Ahg347167 myb domain protein 0
4 Ahg913205
4 Ahg908227
11.4018 Ahg897345 RING/U-box protein with C6HC-type zinc finger
11.9583 Ahg339129 Protein kinase superfamily protein
12 Ahg913089 Cytochrome c oxidase, subunit Vib family protein
12.6095 Ahg926203 Eukaryotic aspartyl protease family protein
12.6886 Ahg485579 3-ketoacyl-CoA synthase 15
14.5602 Ahg923031 Phosphatidylinositol N-acetyglucosaminlytransferase subunit P-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression