Detail


ID : Ahg485579

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|485579|fgenesh2_kg.5__1571__AT3G52160.1
Sequence
ACAAGGGTTT GATGCCTACT GAAAATGGAA AAAGAGGCAA CAAAGATGAT GAATGGTGGA GTTAAGTCAA AGTCACCCAA GGGCAGTCCT GATTTCCTCG GATATGTGAA TATGAGATAC GTCAAGCTTG GATACATTTA CCTTCTCTCT CTCTCCCGTA CCTTTTCTTT CTTCATTCCT CCTCTTCTCC TTCTCTTTAT CTTTGTATAT CGGTTTCTCC CAATCTTGGC TTTTCCTTTA TACATCTTCT TTCTCCTCCT CATCTATCAT TTTCTTACTC CTTCCTCTGT TTTTCTTCTC GATTTCTCCT GTTACCGCCC ACCCGATCAT CTCAAGATTA CGAAAAGCGA CTTCATCGAG CTGGCAATGA AGTCTGGTAA CTTCAACGAG ACTGCCATCG AGCTTCAAAG AAAAGTGCTG GACCAATCAG GGATAGGAGA GGAGAGTTAC ATGCCAAGAG TGGTGTTCAA GCCTGGTCAC AGGGTCAATC TTCGTGATGG TCGTGAAGAA GCAGCAATGG TGATCTTTGG AGCAATTGAT GAACTTCTTG CAGCAACCAA AATCAACGTG AAGCATATCA AGATCCTGGT GCTAAACTGC GGAGTCCTCA ACACCACGCC TTCTCTATCG GCCATGGTGA TTAACCATTA CAAGCTCAGG CATAACACAG AGAGCTACAA TCTTGGTGGT ATGGGATGTG GCGCTGGAAT CATAGCCATT GATTTAGCCA AAGATCTTTT GAACGCTCAT CAAGGCTCTT ATGCTTTGGT GGTGAGCACT GAGATAGTAA GCTTCACTTG GTACTCAGGT AATGACGTCG CGTTGCTTCC ACCAAATTGC TTCTTTCGAA TGGGAGCAGC TGCAGTTATG TTATCTAGTC GGCGTATCGA CAGATGGCGA GCCAAATACC AACTTATGCA GCTAGTAAGA ACCCATAAAG GCATGGACGA CACAAGTTAT AAGAGCATAG AATTGAGAGA AGACAGAGAT GGGAAACAAG GACTGTATGT ATCTAGAGAT GTGATGGAAG TTGGTCGCCA TGCACTCAAA GCAAACATTG CAACACTTGG TCGTCTTGAG CCTTCTTTTG AGCATCTATG TGTATTGGCA TCGAGTAAGA AAGCGCTTGA TGAGATTCAA AAGGATCTCA AGTTGACGGA AGAGAATATG GAGGCATCAA GACGGACACT GGAACGTTTC GGGAATACAT CAAGCAGCAG TATATGGTAC GAGCTGGCTT ACTTGGAACA CAAAGGGAAA ATGAAAAGAG ATGATAGGGT TTGGCAGATC AGTTTCGGGT CAGGGTTTAA ATGCAACAGT GTTGTATGGA AGGCCCTAAA AAACATTGAC TCTCCAAGAC ACAATAACCC ATGGAATCTC TGA
Length1383
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15100892.. 15102441
Download Sequence
A.thaliana
AGI-codeAT3G52160.1
Description3-ketoacyl-CoA synthase 15
TAIR curator summaryEncodes KCS15, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[KCS15][3-ketoacyl-CoA synthase 15]
Gene coexpression
MR
MR Locus Description
2 Ahg925160
3 Ahg923569
4.47214 Ahg347167 myb domain protein 0
8.12404 Ahg915897 Integrase-type DNA-binding superfamily protein
9 Ahg913089 Cytochrome c oxidase, subunit Vib family protein
9.79796 Ahg951944 basic leucine-zipper 70
10.7238 Ahg897674 with no lysine (K) kinase 3
12.6886 Ahg899853 glutamate receptor 2.2
16.9706 Ahg937932
22.1811 Ahg476244 GDSL-motif lipase/hydrolase 6
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression