Detail



ID : Ahg899893

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|899893|Al_scaffold_0004_543
Sequence
GAAATCTCTC CGACGCGTTT GATCCGCCTC AGATCTCTCG CTCTTTCGTC TTCTTCTTCT TTCCGATTTG CACATCGTCC TCTGTCATCG ATTTCACCGA TAAAGTTACC GAATTTTCGT GCTTTCTCGG GTACCGCAAT GACAGATACT AAAGATGCTG GTAAGGATGC TGTTCAGAGA CGTCTCATGT TTGAAGACGA GTAA 
Length204
Protein Sequence
Protein Residue
Map Locationscaffold_4: 3259654.. 3259857
Download Sequence
A.thaliana
AGI-codeAT3G02780.1
Descriptionisopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2
TAIR curator summaryEncodes a protein with isopentenyl diphosphate:dimethylallyl diphosphate isomerase activity. There is genetic evidence that it functions in the mevalonate, but not the MEP biosynthetic pathway.
Alias[IDI2][IPIAT1][IPP2][ATISOPENTENYL DIPHOSPHE ISOMERASE 2][isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2]
Gene coexpression
MR
MR Locus Description
9.48683 Ahg927734 ROTUNDIFOLIA like 19
11.1355 Virus1136
21.4942 Virus0334
26.2298 Ahg917508 cyclic nucleotide gated channel 5
30.3315 Ahg935190 GDSL-like Lipase/Acylhydrolase superfamily protein
44.2606 Ahg928631 nuclear transport factor 2 (NTF2) family protein / RNA recognition motif (RRM)-containing protein
45.6946 Ahg928276
46.2817 Ahg490886 cytochrome P450, family 81, subfamily D, polypeptide 3
47.6235 Ahg492961 AtS40-3
48.7852 Ahg942114
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression