Detail



ID : Ahg900341

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900341|Al_scaffold_0004_991
Sequence
ATGACATTGT TTTTGCTTTG TATACGCCCT TCATTTGAGC TATTAAGTCC TGAGGAAGCT GATAAAGTTA CAGTTCCACA GAGGCTCGGG CTTCAGTATG TTCGTGGTTG TGAAATCATC GATATCCGCG ATGAGGAGGG TGCTGAGGAT GTGTATAGCA CATTTAATGT GCTAATGAGG AAGCCAAAGG AGAACAACTT CAAGGCTATT CTGGAATCTA TCAGAGATCT CATGAATGAA TATTGTATTG TGCCGGAGTG GTTGCATAAT GTTTTTCTTG GGTATGGCAA CCCTTCTGCT GCACAGTGGC CTAATATGCC AAACCTGTTG GAAACAGTGG ACTTCAAAGA TACTTTCCTT AATGCAAATC ATCTCAGTGA AAGTTTTCCA GATTATGAGG TATCTTTCAT CAATGCTGAA GGTGCTGAAG CTCTGGATCC AAGTCCTCCG TTCCGAATCA CTCTTCCAAA GACACTAAAA GGAAATGCTG CTATTTCTGG AAACAAGATA TCTGAAGTCA ATTCAGCAGA CAATGTTAAT ATGGTGGATG CTTCCCCGAA GGAGAAACTT ATTGTTGAGG CATATACCTC AACCGGACCC AGGGCGTTAT CCTCAGGACC AGCCGAAGCA GAACTCAGTT GGAGCAATTA TCTCTGGTAT TCAGCCTGGG CTAACTATGG TGGTTGGTCC ACCAGGGATG TACAAGCGCG GTATCTACTG CGTTTAGGTC AAGGTGAACA AGAGCTTGCT ACTGATCTTG ACTTTAGCAG ACAAGGCCGT GTCAATGCCA TGCTTGTTCG GCGTCTGGAA CTGCTCAATG AGGTTGAGAG ACTAGCAAGG TCTCTTCAGC TTCCAGAGGA TGTAGGATAT ACTTGTGAAA CAGCTGGGTA TTTCTGGTTG CTTCATATAT GCTCGCGCTG GGAGCTATTT CTCGCTGCTT GTGCAGGAAA TGAAGACAAT CAATCTTTTG TTCGAGATGG CTTCCCGTTC AAAGATTTCT TCTCAGACAC CCCTAAACCT GTATTTAGTG GGGAGTCATT TGAGAAAGAC ATGAGGGCAG CTAAAGGTTG TTTCTCTCAT ATCAAGACTG TGTTCCAAGA GCTAGAAGAG TGTAGGGCCT TTGAACTACT CAAGTCAACT GCTGATAGAG CAAATTATCT GATGACCAAA CAAGCAAAGA TTGTAGCAAT GATGTGTACT CATGCGGCAT TAAAGAGGAG AGATTTTCTT CAGTTAGGGT TCAAATATGA TAACTCATTG ATGGAAGATA GTGCTCAAAT TTTGGAAATT GAGACTTTCA TACCAATGTT GCTTCAGAGG CAAGAAGATG GTGGTCATGC ACGACTCAAG CGCTGTATAT TGATTGGTGA TCACCACCAG CTGCCTCCCG TGGTGAAGAA TATGGCTTTC CAGAGAAAGA TAGTCACATG GATCAGTGTT TGTTTACGAG GTAGAGCCAG GCCAAGCTTA GCCAAACTCT ACAACTGGAG ATACAGGGAT TTAGGAGACC TTTCCATTGT TAAGAAAGCA CCCATCTTCC AGAGAGCAAA TACTGGATTC TCATATGAAT ATCAGTTGGT GAATGTGCCT GACTATGAGG GGAAAGGAGA ATTGACACCA TCTCCATGGG TTTATCAAAA TCAGGGAGAA GCTGAATGTA TCGTCAGTGT CTATATATAC ATGAGATTGT TAGGATATCC TGTGAATAAG ATATCAATAT TGACAACATT TAATGGTCAG AAGCTCTTAA TCTGTGATGT TATCAACCGT CGATGTGTTC CCTATCCATT CATTGGCCCT CCGAGCAAGG CATTTTGGTT GCAATTTTGG TTTTTTGGTG ACTACAGTGG ACAACAGAAT GATTTTATAT TGCTCTCTCT TGTACGGACA CGCTTTGTAG GTCATCTACG TGATGTAAGA AGGTTGGTAG TTGCAATGTC ACGTGCTCGG CTTGGTTTTG CTATGAGCTG CAACCAACAT TTCAACTACT TCTTCAAAGA CCCGAGCGGC TCAGACTCAA TTAGTGCTGT GGAGGAAGTT GGAAATCCTT ATCTCGTTCA TGATGTTGAA GAGCTGGCAC ACATAGTTCA CGATAGGATG AACCAGTTCT ACCAGGAGCG ATACAAGAAC AACATGCCAC AGACGGAAGA TGGTAATCAC GACATGGAGA GTGATTCAGT AGTAGGAGCT GTAGATGGTG ATGAATCTGA GAAAAATATG CAGCAGCTAA ACCAAGCTCC AGACATAGAC GGTGAATTAT CGAAGGAGGT GGACAATAAT GGATTTAGCA GTGAGAATGG AAAGGCTGAT GAGAAAAATT AG 
Length2322
Protein Sequence
Protein Residue
Map Locationscaffold_4: 10165186.. 10168826
Download Sequence
A.thaliana
AGI-codeAT2G38770.1
DescriptionP-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR curator summary
Alias[EMB2765][EMBRYO DEFECTIVE 2765]
Gene coexpression
MR
MR Locus Description
16 Virus0615
40 Ahg351825 Protein of unknown function (DUF1685)
56.3649 Ahg490508 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein
89.3644 Ahg935438 Pentatricopeptide repeat (PPR-like) superfamily protein
92.8386 Ahg915915
93.1236 Ahg471253 Secretory carrier membrane protein (SCAMP) family protein
97.5295 Ahg947466 TRAF-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression