| Annotation |
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| Description | jgi|Araly1|900425|Al_scaffold_0004_1075 |
| Sequence |
ATGGATTCAA GAAGTCTTGT GCTACTCCTA CTCTTCTGCC TCTTGTTCCT TCATGATGCT TCTGGTCTCA CTCACGCTAA TGCTCACATT CATGGACTTC CCTCCCGCAA GATGATGAAG ATGGAGAGGG AATGGGTAGG AGCTAATGGA GAAGAAGAGA AGGCGAAGAA GAAGGGTTTA GGACTACATG AAGAGCTAAG GACTGTTCCT TCAGGACCTG ACCCGTTGCA CCATCATGTG AACCCACCAA GACAGCCAAG AAACCAATCT AATATCCCTT GA |
| Length | 282 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_4: 10907819.. 10908399 |
| Download Sequence |
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| A.thaliana |
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| AGI-code | AT2G27250.3 |
| Description | CLAVATA3 |
| TAIR curator summary | One of the three CLAVATA genes controlling the size of the shoot apical meristem (SAM) in Arabidopsis. Belongs to a large gene family called CLE for CLAVATA3/ESR-related. Encodes a stem cell-specific protein CLV3 presumed to be a precursor of a secreted peptide hormone. The deduced ORF encodes a 96-amino acid protein with an 18-amino acid N-terminal signal peptide. The functional form of CLV3 (MCLV3) was first reported to be a posttranscriptionally modified 12-amino acid peptide, in which two of the three prolines were modified to hydroxyproline (Ito et al., Science 2006, 313:842; Kondo et al., Science 2006, 313:845). Ohyama et al. (2009) later reported that the active mature CLV3 is a 13-amino-acid arabinosylated glycopeptide (Nature Chemical Biology, 5:578). CLV3 binds the ectodomain of the CLAVATA1 (CLV1) receptor-kinase. Regulates shoot and floral meristem development. Required for CLAVATA1 receptor-like kinase assembly into a signaling complex that includes KAPP and a Rho-related protein. It restricts its own domain of expression, the central zone (CZ) of the shoot apical meristem (SAM), by preventing differentiation of peripheral zone cells, which surround the CZ, into CZ cells and restricts overall SAM size by a separate, long-range effect on cell division rate. CLE domain of CLV3 is sufficient for function. |
| Alias | [AtCLV3][CLV3][CLAVATA3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 23.9165 |
Ahg329301 | Cysteine proteinases superfamily protein |
| 34.8999 |
Ahg476651 | Nucleotide-diphospho-sugar transferase family protein |
| 35.3836 |
Ahg949069 | transposable element gene |
| 39.8372 |
Ahg927567 | SWIB/MDM2 domain superfamily protein |
| 60.3987 |
Ahg944317 | Arabidopsis protein of unknown function (DUF241) |
| 71.3583 |
Ahg488850 | ROP uanine nucleotide exchange factor 10 |
| 74.92 |
Ahg351609 | Protein of Unknown Function (DUF239) |
| 77.3563 |
Ahg483306 | |
| 78.4347 |
Ahg925744 | |
| 80.1249 |
Ahg897183 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
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| RNA-seq |
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Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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