Detail



ID : Ahg900505

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900505|Al_scaffold_0004_1155
Sequence
ATGATCGTTC TTTTTCTTCA AATCATTACA TGTTTTCTCT TCACCGCCAC TGCCTCATCA CCTCACGGCT TCACCATTGA CTTGATCCAG CGTCGTTCGA ATTCATCTTC TTCTCGACTG TCCAAAAATC AGTTGCTCGG AGCATCACCT TACGCCGACA CTGTCTTTGA TTACAGCATC TATCTAATGA GACTACAACT CGGTACTCCT CCTTTCGAGA TCGTAGCAGA GATAGACACA GGAAGTGACC TTATATGGAC ACAATGTATG CCTTGTCCTA ACTGCTACAC ACAATTCGCT CCTATATTCG ACCCTTCTAA ATCTTCAACC TTCAAAGAAA AAAGATGCCA TGGGAACTCT TGTCCTTACG AGATTATCTA CGCGGACGAA AGCTATTCCA CGGGAATCTT GGCAACCGAG ACGGTCACAA TCCAGTCCAC TTCAGGAGAG CCCTTTGTGA TGGCTGAAAC ATCCATTGGG TGTGGCCTCA ACAACTCAAA CCTCATGACA CCAGGGTATG CAGCGAGTTC TTCGGGCATT GTTGGTCTAA ACATGGGACC TTCGTCGCTT ATCTCTCAGA TGGACTTGCC CATCCCAGGT CTTATATCTT ACTGCTTTTC TAGTCAAGGA ACTAGTAAGA TCAATTTTGG AACAAATGCT GTTGTGGCAG GAGATGGGAC GGTAGCAGCC GATATGTTTA TCAAGAAAGA TCAACCTTTC TATTACCTAA ACCTAGACGC GGTCAGCGTT GGGGACAAAC GCATTGAGAC ATTGGGGACA CCGTTTCATG CCCAAGACGG GAACATTTTT ATAGACTCTG GAACCACTTA CACGTACTTA CCTACGAGCT ACTGCAACCT AGTGAGGGAG GCAGTGGCGG CAAGTGTTGT GGCAGCGAAT CAAGTACCTG ACCCGAGCAG TGAGAACTTG CTTTGCTACA ATTGGGACAC CATGGAGATC TTTCCGGTGA TCACATTGCA TTTTGCTGGC GGTGCGGATC TTGTCTTGGA TAAGTACAAT ATGTATGTCG AAACGATAAC GGGAGGAACC TTTTGTCTAG CTATTGGGTG TGTTGATCCG TCAATGCCTG CTATCTTTGG GAATAGAGCG CATAACAATT TATTGGTGGG TTATGATTCT TCAACATTAG TGATTTCTTT TAGTCCCACT AATTGTTCTG CACTATGGAG TTGA 
Length1194
Protein Sequence
Protein Residue
Map Locationscaffold_4: 11388970.. 11390163
Download Sequence
A.thaliana
AGI-codeAT2G28220.1
DescriptionEukaryotic aspartyl protease family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
22.8473 Ahg333411
24.1454 Ahg313743 PLATZ transcription factor family protein
30.7571 Ahg473114 Papain family cysteine protease
36.9459 Ahg915672 F-box/RNI-like/FBD-like domains-containing protein
39.3827 Ahg936973 RING/U-box protein with C6HC-type zinc finger domain
43.6807 Ahg494703
48.3735 Ahg320180 SKU5 similar 16
59.6154 Ahg487573 Pectin lyase-like superfamily protein
65.9318 Ahg315612 F-box and associated interaction domains-containing protein
66.7233 Ahg943324 RNI-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression