Detail



ID : Ahg320180

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|320180|fgenesh1_pm.C_scaffold_4000237
Sequence
ATGAAGCAGA AAAATCTCCT GCTTCTAGGG TTCTTATTGG CTTATTGCTT CAGCTCTGTT TTTGTGATAA ACGCAGAGGA CCCGTATCTT TTCTTCACTT GGACTGTTAC TTATGGAACC AGATCTCCTT TAGGTGTTCC TCAACAGGTT ATACTTATTA ATGGCCAGTT TCCTGGTCCT CCAATTGAAG GTGTAACAAA CAATAATATC GTTGTTAATG TCATTAACAA GCTTGACGAA CCTTTCCTCA TCACCTGGAA TGGAATTAAA CAGAGGAGGA TGTCGTGGCA AGACGGTGTT TTGGGAACAA ACTGTCCGAT CCAACCAAAA TCGAATTGGA CTTACCATTT TCAACTTAAA GACCAAATCG GTACTTATAC ATACTTTGCT TCCACGTCGA TGCACAGAGC AAGTGGTGCT TTTGGTGGAC TTAATGTTAA CCAGAGGTCA GTCATCTTCG TTCCTTACCC TAAACCAGAC GCTGATTTCA CTCTCCTCGT CGGTGATTGG TACAAGATGG GACACAAGGA ACTGCGTAGG AGGCTCGACT CAGGTCGTGA TCTTCCTCCT CCGGATGGTC TTCTCATCAA CGGTGCTTCT AAAGGTTTAG TCTTCACCGG GCAACATGGC AAGATATATA GGTTTCGGAT ATCGAATGTT GGGATATCGA CATCAATTAA CTTTAGGATA CAAGGACACA TGATGACTCT CGTTGAAGTA GAAGGCTCTC ACACTCTACA AGAGGTCTAT GAGTCACTTG ACATACACGT TGGCCAGTCT GTGACCGTGC TGGTCACATT GAAGGCTCCA GTGAAGGACT ACTTTATTGT AGCTTCAACC CGATTTACCA AACCGGTGCT GACTACTACA GGAATCCTCA GTTACCAAGG CTCCAAAATC AGACCATCTC ATCCCCTTCC CATTGGTCCT ACTTACCATA TTCACTGGTC CATGAAACAA GCAAGAACCA TCAGGTTAAA TTTGACGGCG AATGCAGCAA GACCAAATCC ACAAGGATCC TTTCACTACG GTACCATACC GATAAATCGA ACTTTTGTTT TAGCCAACGG AAGAGCGAGC ATCAATGGGA AGCTTCGGTA CACAGTAAAC CGTGTGTCCT ACGTTAACCC AACAACTCCA TTGAAATTAG CCGACTGGTT CAACATTCCC GGGGTGTTCA ATTTCAAGAC GATTTTGAAC ATTCCTACAC CAGGACCCTC CATTCTCGGA ACTTCGGTCT TTGACGTGGC TCTTCATGAG TACGTCGAGT TCGTGTTCCA GAACAACGAG ACATCTATAC AATCTTGGCA CCTTGACGGC ACTAGTGCAT ATGTTGTTGG ATACGGGTCG GGCACATGGA ACATGGCCAA CAGGAGGGGT TACAATTTGG TTGATGCTGT TTCAAGGCAC ACTTTTCAGG TGTATCCAAT GTCGTGGACG AGCATATTGG TATCACTAGA CAATAAGGGA ATGTGGAATT TGAGGTCACA AATATGGTCA AGGAGATACT TAGGACAAGA ACTCTATGTT CGTGTATGGA ACGACGAGAG GTCTCTTTAC ACTGAAGCCG AGCCTCCTGT TAATGCTCTC TTTTGCGGCA AAGCCAAACG TCCCCGCTTG ATTTAG 
Length1626
Protein Sequence
Protein Residue
Map Locationscaffold_4: 1830567.. 1833606
Download Sequence
A.thaliana
AGI-codeAT2G23630.1
DescriptionSKU5 similar 16
TAIR curator summary
Alias[sks16][SKU5 similar 16]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg475192 Transmembrane amino acid transporter family protein
6.55744 Ahg952572
6.9282 Ahg930217 F-box and associated interaction domains-containing protein
10.9545 Ahg891733 Curculin-like (mannose-binding) lectin family protein
12.9615 Ahg943328 RNI-like superfamily protein
14.9666 Ahg474058 Protein kinase superfamily protein
16.3095 Ahg473826
20.9284 Ahg937218 RING/U-box protein with C6HC-type zinc finger
22.2261 Ahg937413 F-box associated ubiquitination effector family protein
23.7908 Ahg478121 Pectin lyase-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression