Detail



ID : Ahg900551

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900551|Al_scaffold_0004_1201
Sequence
ATGAAGTTCT TCTCCGATCA AAACCTCTCT TACGCTGATA TTCTTCTCCC TCACGAAGCT CGTGCTAGAA TCGAAGTCTC TGTTCTCAAT CTCCTTAGAA TTTTAAATTC CCCTGATCCA GCTATCTCTG ATCTCTCCCT GAGCCAGTGT GGGTGGCTTG AGCTCTGGGT ACAAAAACAG TGTGGCTTGA GCTCTGAGTT GCTGAAAATT CTTGAAGTTG AGAATGTCCA CATAGGCTTG TCTCCTAATG TTCCACTCTA CAAAATGAAT GAAGGGAACG AGCCATGCTT CTTCACCACT TACTTTTGTT GGGATCCCAC TAAAGCAATC GCACAAGGAA ACTCATTCCA GAAAAAGGCA GTGTTGTTAT TTGGCACTCA CCACGTTGTG GAGGTACTAC ACCTCTGCAT TTTCAGTTTT GTTAATTAG 
Length429
Protein Sequence
Protein Residue
Map Locationscaffold_5: 10509234.. 10510658
Download Sequence
A.thaliana
AGI-codeAT2G41740.1
Descriptionvillin 2
TAIR curator summaryEncodes a protein with high homology to animal villin.
Alias[ATVLN2][VLN2][villin 2]
Gene coexpression
MR
MR Locus Description
17.7764 Ahg944810
23.3666 Ahg907079
25.7488 Ahg905723 Tetratricopeptide repeat (TPR)-like superfamily protein
41.2553 Ahg940321
41.2553 Virus0279
42.6615 Ahg949018 AP2/B3-like transcriptional factor family protein
57.2887 Ahg894149 F-box family protein
60.2993 Ahg936741 F-box associated ubiquitination effector family protein
60.6218 Ahg357047
69.3902 Ahg355773 SEC7-like guanine nucleotide exchange family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression