Detail



ID : Ahg900805

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|900805|Al_scaffold_0004_1455
Sequence
ATGGATGTGG TGGGGGAAAG CTCTTCGACT CAAAATGAGG TAGGAGAGAA GCCTGTGATT GTTAGAGTTA AGCGAAAAGT TGGACAGTCT TTGCTCGATG CTTTCTGGTT GGAGATAAAT GAAAGACCAC TCAAACGGCC CACTCTGGAT TTATCAAAGC TATCTATTTC AGATTCGTGT GAGAGAGGTC CTTCTGTGGC AGAGGATGTG AAACCGAAGA AGGTGCTGGT GCGGCATTTG GAGACAGTCA CGGACTCTGA AACCACCGCT GACATTATCC ACTCTCTCTT TGAGTCTGAT CTTACTGAGA AAAGTTGCAG CAAAGGAAAG TTTGAGGAGC GGAAATTTGC TTTCAAGAAA GACAATAGAA AGGAACAGCG CCTGACCAAA TCTGTACAAA AGCAACAGAT TGCTGCAATG AATGCTCGGT TTGAGCAAAT ATGGCGGAGT AGGAAGGGAA ACAAGGAAGG CATCCATGAT AAGTGCCATT TCTTTGACGT TATTCGTGTT GATGCTGAAG AAAGACAAGA CAGTGAACAA GAGTTTACAT CCTCGGAGGA CCAGAAAATA CTCGCTAGTT TCTTGCCTCT CCTTAGAGAA TGTATTCCAA CAGCAGCTGA AGAGATTGAA GCTGATATAC AATCTAGTCA CACCGAAGAA TACGTTTATG ATTATTATGC TGTGAACGAA GAGATGGATA TCAGCGAAGA TAGTTCCAAG AATCAGTTTC CTCTTGTCAT AGTAGAGGAT GAAGAAGAAT TCTGTGATGG ATCTGATGAA TCAGACTTTG ACTCTGAAGA TTCAAACGCT GAAGATCATC CAAAGACCGA TTACCCAGAA GAGATCTCTG AAGACGAGGA GGAAGAAGAA GAAGAAGAAG ATGATGATGA TGATGATGAA ACAGAAAAAG AAAAGAGTGA AGCCTCTGAT GAATCAGACG ACGAGGAGAC TTCACAAAGA CATGTGAGAA GGGTCCTTGG AGATGACGAG TTTGATGATT ACGAAGAGGA TGTGAATGAT TATAGGGAGA GCGAGGAGGA GTTTGAGTCT TACTAA 
Length1056
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13396904.. 13399031
Download Sequence
A.thaliana
AGI-codeAT2G30280.1
DescriptionRNA-directed DNA methylation 4
TAIR curator summaryEncodes RDM4, a transcriptional regulator functioning in RNA-directed DNA methylation and plant development.
Alias[DMS4][RDM4][DEFECTIVE IN MERISTEM SILENCING 4][RNA-directed DNA methylation 4]
Gene coexpression
MR
MR Locus Description
41.6413 Ahg922615
69.152 Ahg479012 Transducin/WD40 repeat-like superfamily protein
71.4983 Ahg935751 SWITCH/sucrose nonfermenting 3A
75.3989 Ahg478222 mRNA capping enzyme family protein
77.1686 Ahg949509
81.265 Ahg490606
84.8057 Ahg319075
88.4873 Ahg318289 Tetratricopeptide repeat (TPR)-like superfamily protein
89.9778 Ahg484052 quinolinate phoshoribosyltransferase
94.4722 Ahg491672 cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression